Gene
RNA
| Item | Value |
|---|---|
| gene id | G2178326 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 34678584 ~ 34678907 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2489852 | True | 324 | lncRNA | 0.44 | 1 | 34678584 | 34678907 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110510152 | LOC106563684 | coding | downstream | 49282 | 34619958 ~ 34629302 (-) |
| hif1al2 | LOC106563688 | coding | downstream | 113443 | 34546781 ~ 34565141 (-) |
| trnas-gcu-266 | NA | coding | downstream | 132199 | 34546304 ~ 34546385 (-) |
| LOC110510139 | LOC106563695 | coding | downstream | 294000 | 34362509 ~ 34384584 (-) |
| LOC110510135 | LOC106563696 | coding | downstream | 336124 | 34338911 ~ 34342460 (-) |
| leap-2b | leap-2b | coding | upstream | 5512 | 34684417 ~ 34685804 (-) |
| LOC110510156 | LOC106563681 | coding | upstream | 37032 | 34715939 ~ 34727232 (-) |
| LOC110510161 | LOC106563678 | coding | upstream | 130964 | 34809871 ~ 34814939 (-) |
| LOC110510165 | atg4a | coding | upstream | 172289 | 34851196 ~ 34862503 (-) |
| LOC110510171 | NA | coding | upstream | 286222 | 34965129 ~ 34979665 (-) |
| G2178313 | NA | non-coding | downstream | 17340 | 34658175 ~ 34661244 (-) |
| G2178312 | NA | non-coding | downstream | 23964 | 34654078 ~ 34654620 (-) |
| G2178283 | NA | non-coding | downstream | 64329 | 34612840 ~ 34614255 (-) |
| G2178276 | NA | non-coding | downstream | 88956 | 34589170 ~ 34589628 (-) |
| G2178274 | NA | non-coding | downstream | 90649 | 34587612 ~ 34587935 (-) |
| G2178362 | NA | non-coding | upstream | 67250 | 34746157 ~ 34746483 (-) |
| G2178374 | NA | non-coding | upstream | 81856 | 34760763 ~ 34762133 (-) |
| G2178377 | NA | non-coding | upstream | 84339 | 34763246 ~ 34763490 (-) |
| G2178380 | NA | non-coding | upstream | 87005 | 34765912 ~ 34766184 (-) |
| G2177991 | cfb | other | downstream | 531265 | 34092047 ~ 34216247 (-) |
| G2177695 | NA | other | downstream | 1166258 | 33511296 ~ 33512326 (-) |
| G2176363 | NA | other | downstream | 2034012 | 32643402 ~ 32644572 (-) |
| cpi1 | cpi1 | other | downstream | 2244943 | 32395346 ~ 32433641 (-) |
| G2178372 | NA | other | upstream | 124284 | 34792330 ~ 34809382 (-) |
| G2179862 | NA | other | upstream | 1283077 | 35961984 ~ 35962832 (-) |
| LOC110510209 | LOC106563761 | other | upstream | 1825566 | 36499597 ~ 36596534 (-) |
| G2180120 | NA | other | upstream | 1827633 | 36506540 ~ 36507120 (-) |
| LOC110509384 | NA | other | upstream | 2298247 | 36975909 ~ 36979761 (-) |
