G2178374


Basic Information

Item Value
gene id G2178374
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 34760763 ~ 34762133 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2489913
attattcagcccctttactttcagggcAGCAAACTCTCAGACGGTAGGCACTCTAGTGGTGTccggctgtgctttggcaaagtgggtggggttatatcctgccagTTTGGCCATCcgtggccacagtgtctcccgacccctgctgtctcagcctccagtattatgctgcaatagtttgtcagggggctagggtcagtcttatatctggagtatttatcctggctcatccggtgtcctgtgtaaatttaagtatattctctctctgtcctaggaccatgcatcaggactacctggcctgatgactccttgctgtccccagtccacctggtcgtgctgctgctccagtttcaactgttctgcctgcggctatgaaaccctgacctgttcaccagacgtgctaccatgtcccagacctgttgttttcaACCCTctagacagcaggagcggtagagacactctgaatgatcggctatatgacctgttgcaccctcgaaaaccactgtgattattatcatctgaccctgctggtcatctatgaacatttgaacatcttggccatgttctgttataatctccacccggcccagccagaagaggactggccaccccactcctctataggtttcttcctaggttttggcctttctagggagttttccctagccaccgtgcgtctacacctgtattgcttgctgtttggggttttaggctgggtttctgtacagcactttgatatcagctgatgtaagacggggtttataaatagatttgattgatTGCTGACAGCGAATTAAGTACTAAAATCATTGCATAAGCAAGAGAAAATAATTGACATAGTGGGTGTACTCACTAAAGTAGCTAACAGTGAAGTAGCTGACAGTGATTGTGTTATTGTATGGACATGTCTGGGTCCAGCCAGAAGTACAATCTCATagaaaaacacatacagtacacagataTTTAATCTCTCAAGTGTCAATTAACAACTGGATAATTGAGTTTTCATACAAAACCTTGAGAAATCTAGAATGCTacataacaaaaaaaacattgttaaACCCTATTGTCTGTTTGACATTCTCTTCCTATTACATGCATTTTGTATTAGTGTAAAAAATAACTACTCTAAAACAAATTCAACAGACTGTGCTCTTGTTGATTTTTAAACATTTTCCTCTACAAGGAGACAACAAATATATGACATACAAATAAATAACCTATTTACACTATTAGCAGACAGAGTTCCTCCTCCTGTGGTTCACTTAGGAGACTTGCTGCTCTATCAGAGCATCTTCTAGTGTCTGGACAGCCACCAAGGGAATACACGCTACCTCAAAGAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2489913 True 1340 lncRNA 0.44 2 34760763 34762133

Neighbor

gene id symbol gene type direction distance location
LOC110510156 LOC106563681 coding downstream 33531 34715939 ~ 34727232 (-)
leap-2b leap-2b coding downstream 74992 34684417 ~ 34685804 (-)
LOC110510152 LOC106563684 coding downstream 131461 34619958 ~ 34629302 (-)
hif1al2 LOC106563688 coding downstream 195622 34546781 ~ 34565141 (-)
trnas-gcu-266 NA coding downstream 214378 34546304 ~ 34546385 (-)
LOC110510161 LOC106563678 coding upstream 47738 34809871 ~ 34814939 (-)
LOC110510165 atg4a coding upstream 89063 34851196 ~ 34862503 (-)
LOC110510171 NA coding upstream 202996 34965129 ~ 34979665 (-)
LOC110510172 dach2 coding upstream 241783 35003916 ~ 35289538 (-)
LOC118945291 NA coding upstream 587232 35349365 ~ 35368562 (-)
G2178362 NA non-coding downstream 14280 34746157 ~ 34746483 (-)
G2178326 NA non-coding downstream 81856 34678584 ~ 34678907 (-)
G2178313 NA non-coding downstream 99519 34658175 ~ 34661244 (-)
G2178312 NA non-coding downstream 106143 34654078 ~ 34654620 (-)
G2178377 NA non-coding upstream 1113 34763246 ~ 34763490 (-)
G2178380 NA non-coding upstream 3779 34765912 ~ 34766184 (-)
G2178383 NA non-coding upstream 10579 34772712 ~ 34772942 (-)
G2178385 NA non-coding upstream 14632 34776765 ~ 34777209 (-)
G2178387 NA non-coding upstream 17090 34779223 ~ 34779473 (-)
LOC110510135 LOC106563696 other downstream 418950 34338911 ~ 34342460 (-)
G2177991 cfb other downstream 613444 34092047 ~ 34216247 (-)
G2177695 NA other downstream 1248437 33511296 ~ 33512326 (-)
G2176363 NA other downstream 2116191 32643402 ~ 32644572 (-)
cpi1 cpi1 other downstream 2327122 32395346 ~ 32433641 (-)
G2178372 NA other upstream 41058 34792330 ~ 34809382 (-)
G2179862 NA other upstream 1199851 35961984 ~ 35962832 (-)
LOC110510209 LOC106563761 other upstream 1742340 36499597 ~ 36596534 (-)
G2180120 NA other upstream 1744407 36506540 ~ 36507120 (-)
LOC110509384 NA other upstream 2215021 36975909 ~ 36979761 (-)

Expression


Co-expression Network