Gene
RNA
| Item | Value |
|---|---|
| gene id | G2178698 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 34975874 ~ 35016990 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2490279 | True | 338 | lncRNA | 0.49 | 2 | 34975874 | 35016990 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110510165 | atg4a | coding | downstream | 113371 | 34851196 ~ 34862503 (-) |
| LOC110510161 | LOC106563678 | coding | downstream | 160935 | 34809871 ~ 34814939 (-) |
| LOC110510156 | LOC106563681 | coding | downstream | 248642 | 34715939 ~ 34727232 (-) |
| leap-2b | leap-2b | coding | downstream | 290103 | 34684417 ~ 34685804 (-) |
| LOC110510152 | LOC106563684 | coding | downstream | 346572 | 34619958 ~ 34629302 (-) |
| LOC118945291 | NA | coding | upstream | 332375 | 35349365 ~ 35368562 (-) |
| LOC110510176 | LOC106563749 | coding | upstream | 382346 | 35399336 ~ 35421812 (-) |
| LOC110510173 | LOC106563748 | coding | upstream | 404976 | 35421966 ~ 35454525 (-) |
| ik | ik | coding | upstream | 478295 | 35495285 ~ 35505716 (-) |
| LOC110510180 | tcof | coding | upstream | 490057 | 35507047 ~ 35524067 (-) |
| G2178667 | NA | non-coding | downstream | 46213 | 34925642 ~ 34929661 (-) |
| G2178463 | NA | non-coding | downstream | 75381 | 34900276 ~ 34900493 (-) |
| G2178462 | NA | non-coding | downstream | 76025 | 34899604 ~ 34899849 (-) |
| G2178458 | NA | non-coding | downstream | 79407 | 34896153 ~ 34896467 (-) |
| G2178444 | LOC106602948 | non-coding | downstream | 100944 | 34874436 ~ 34874930 (-) |
| G2178733 | NA | non-coding | upstream | 66710 | 35083700 ~ 35084289 (-) |
| G2178783 | NA | non-coding | upstream | 147902 | 35164892 ~ 35202930 (-) |
| G2178832 | NA | non-coding | upstream | 213466 | 35230456 ~ 35230691 (-) |
| G2178878 | NA | non-coding | upstream | 275437 | 35292427 ~ 35292651 (-) |
| G2179137 | NA | non-coding | upstream | 304968 | 35321958 ~ 35322371 (-) |
| G2178372 | NA | other | downstream | 166571 | 34792330 ~ 34809382 (-) |
| LOC110510135 | LOC106563696 | other | downstream | 634061 | 34338911 ~ 34342460 (-) |
| G2177991 | cfb | other | downstream | 828555 | 34092047 ~ 34216247 (-) |
| G2177695 | NA | other | downstream | 1463548 | 33511296 ~ 33512326 (-) |
| G2176363 | NA | other | downstream | 2331302 | 32643402 ~ 32644572 (-) |
| G2179862 | NA | other | upstream | 944994 | 35961984 ~ 35962832 (-) |
| LOC110510209 | LOC106563761 | other | upstream | 1487483 | 36499597 ~ 36596534 (-) |
| G2180120 | NA | other | upstream | 1489550 | 36506540 ~ 36507120 (-) |
| LOC110509384 | NA | other | upstream | 1960164 | 36975909 ~ 36979761 (-) |
| G2180587 | NA | other | upstream | 1964967 | 36981957 ~ 36982709 (-) |
