G2179178 (s226a)


Basic Information

Item Value
gene id G2179178
gene name s226a
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 35403440 ~ 35468274 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2490808
AAATTCTGATTTGTCATAGGTCCAGCCATCCAGACATATCTCTGTCTCAAGCTCTGAAAAGTTAGCCTGATGTCCAATGACGCTGACGTTGCTTTCAAGAAGATGCCACTGCGCCTCGACATACCTCGTACACTTGGACAATTTGGTCCCGCTGGCATCCATCGGGATAAAGGCGCGAAGGAGCTCTCTGTCATCCACTTCTGATTGAGATATGTTTTGACTACTGGCAATAGAAGTCCTATTGGGTATGGTACAGTGATGTCCAGGCATACCAGCTGTGAAATTATTCAACAGATTCTGGCTTGCCATCAGTAGACCAGGGATAGATAACAAGGTAACATGGATCCATTGGAAACGTCCGAACCCGCCAACGTCATTCAAGAGGTCCGCAAAACCCATATCGGTGAGTCTGAGAGGAACAGTAGGCAAGTGTTAGTAGTCTTTAAACTGCTGTAGCAAAGTCTAAGAACAAGGCTtgcaaaaatttaaaaaaaa

Function

NR:

description
solute carrier family 22 member 6-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2490808 True 495 lncRNA 0.45 2 35403440 35468274

Neighbor

gene id symbol gene type direction distance location
LOC118945291 NA coding downstream 34878 35349365 ~ 35368562 (-)
LOC110510172 dach2 coding downstream 113902 35003916 ~ 35289538 (-)
LOC110510171 NA coding downstream 423775 34965129 ~ 34979665 (-)
LOC110510165 atg4a coding downstream 540937 34851196 ~ 34862503 (-)
LOC110510161 LOC106563678 coding downstream 588501 34809871 ~ 34814939 (-)
ik ik coding upstream 27011 35495285 ~ 35505716 (-)
LOC110510180 tcof coding upstream 38773 35507047 ~ 35524067 (-)
LOC110510228 LOC106563789 coding upstream 338189 35804621 ~ 35817492 (-)
LOC110510227 LOC106563788 coding upstream 372869 35841143 ~ 35871517 (-)
LOC110510226 NA coding upstream 419717 35887991 ~ 35892734 (-)
G2179169 NA non-coding downstream 14192 35388615 ~ 35389248 (-)
G2179167 NA non-coding downstream 15705 35387487 ~ 35387735 (-)
G2179162 NA non-coding downstream 28423 35374526 ~ 35375017 (-)
G2179158 NA non-coding downstream 34458 35368691 ~ 35368982 (-)
G2179156 NA non-coding downstream 38786 35364365 ~ 35364654 (-)
G2179204 NA non-coding upstream 4354 35472628 ~ 35473365 (-)
G2179211 NA non-coding upstream 12781 35481055 ~ 35483881 (-)
G2179135 NA non-coding upstream 36076 35504350 ~ 35506878 (-)
G2179228 NA non-coding upstream 72543 35540817 ~ 35542952 (-)
G2179286 LOC106602935 non-coding upstream 183775 35652049 ~ 35655274 (-)
G2178372 NA other downstream 594137 34792330 ~ 34809382 (-)
LOC110510135 LOC106563696 other downstream 1061627 34338911 ~ 34342460 (-)
G2177991 cfb other downstream 1256121 34092047 ~ 34216247 (-)
G2177695 NA other downstream 1891114 33511296 ~ 33512326 (-)
G2176363 NA other downstream 2758868 32643402 ~ 32644572 (-)
G2179862 NA other upstream 493710 35961984 ~ 35962832 (-)
LOC110510209 LOC106563761 other upstream 1036199 36499597 ~ 36596534 (-)
G2180120 NA other upstream 1038266 36506540 ~ 36507120 (-)
LOC110509384 NA other upstream 1508880 36975909 ~ 36979761 (-)
G2180587 NA other upstream 1513683 36981957 ~ 36982709 (-)

Expression


Co-expression Network