G2179806


Basic Information

Item Value
gene id G2179806
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 35838398 ~ 35839853 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2491554
CTGGAAGCCTGGACGCTGCTGTTATGTGCAAAGAGAAAGACCTTCGGGTTGTCCTCCCACCATTCCTGGTACCCGCCATGGGATTTGTCTTGAGGGTCTGGTAGGTCCATTCATCCAAACCTGGAGTCACCATACACCATTACATACACAATCACATTATTTACAACTCACTGTACTATTAGTGTCAATTTTGAAAAAGCTATAAATGACAGGAGGCCTATGAGAAACAACTACAACTATTACATTATTAACCACTAACATGTAAGCTAACATTGACTGAAACCAACTAGCCTAGAGCTAGCTAGCGCTTAACTAAGCTGGGTTTGGCTAGTGTAATATACTAGCACACTGAGATAGGGATGCGGGTAGAAGAACCAAGTTTATCAGAGGTCACGGGTCAAGTGCAAGTACAGATGACCACATGTAGTAGTTAGTAACAGCGCCAGCCTCAGGCACTCAAGGTAAATACTGTACATGAACAGACATGACATCTCCCTTTCATTAGACTTTTTGAACATTTATTTTTGTATGCTCTTTCAACTCAGTGTTTCACATCACAATATGCAATTGTTAAGCAATATATAACATAACATGGACATCACAATTGTCAGTCTTTTCAGTACTGGTAACGTTTTGGCATTCTGATAAGTCTTCCATAATGAGTTGATTTCACTGTTGTGTCAGTGTTTAACATTGTTGCTTTCCTCTGTTTGTTTTGGTGTTGTTGGTGCTGGAGAACACACAGGTGAGTAGTTTTCTTCCAGGCTGACACTTGTTTCAGGTTCTCTTTCCACAGGATAAGGTCCATTATGGTTTCTGAGTGTCTCTCTGGGTGTGTTGTTTCATGTGTCTCTGGTTCCTTCTGTAGATTCTCTCTTGTTTGGTGTTTGTACTATGTATAACCTTGGCTGGTCATGTTTTCCAAGTACAATTGCTGGTTGCCATTTGTTGTCTTGTCTGATCCTGACTCGTTCTCCTTCCTTCATGACAGAAAGTTTAGGTGTGCCTTGGTCACAGTAGTGTTTTTGTCTCTGTTGTCTGCTTGTGAGACGGCTCCTGAAATGCTGATAGAGTCTCTCTGTTGTCTGCTTGTGAGACAGCTCCTGAAATGCTGATATAGTCTCTCTGTTGTCTGCTTGTGAGACAGCTCCTGAAATGCTGATAGAGTCTCTCTGTTGTCTGCATGTGAGACGGCTCCTGACATGCTGATAGAGTCTCTCTGTTGTCTGCTTGTGAGACGGCTCCTGACATGCTGATAAAGTCCTGGCTTTAACAATCTCTTTAATGTCGGAATCTTTGTCTTCAGCCTTCTTCCCATTAGTAGTTGTGCAGATGAGACCTACTTCAACCAGGGGTGTGTTTCTGTACTCAAGGAGAGCTATGTAAGGATCTCCGTTGCTGTTTTGTGCTTTTTTCAACTTCCACCATAATgtgcaaataaatacataaaaaatcc

Function

NR:

description
PREDICTED: uncharacterized protein K02A2.6-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2491554 True 1456 lncRNA 0.42 1 35838398 35839853

Neighbor

gene id symbol gene type direction distance location
LOC110510228 LOC106563789 coding downstream 20906 35804621 ~ 35817492 (-)
LOC110510180 tcof coding downstream 314331 35507047 ~ 35524067 (-)
ik ik coding downstream 332682 35495285 ~ 35505716 (-)
LOC110510173 LOC106563748 coding downstream 383873 35421966 ~ 35454525 (-)
LOC110510176 LOC106563749 coding downstream 416586 35399336 ~ 35421812 (-)
LOC110510227 LOC106563788 coding upstream 1290 35841143 ~ 35871517 (-)
LOC110510226 NA coding upstream 48138 35887991 ~ 35892734 (-)
LOC118945701 NA coding upstream 49464 35889317 ~ 35889390 (-)
LOC118945702 NA coding upstream 49732 35889585 ~ 35889659 (-)
LOC118945707 NA coding upstream 49994 35889847 ~ 35889921 (-)
G2179379 NA non-coding downstream 34804 35803344 ~ 35803594 (-)
G2179376 NA non-coding downstream 36829 35801334 ~ 35801569 (-)
G2179330 NA non-coding downstream 56380 35778751 ~ 35782018 (-)
G2179356 NA non-coding downstream 66168 35763005 ~ 35772230 (-)
G2179829 NA non-coding upstream 20147 35860000 ~ 35860404 (-)
G2179803 NA non-coding upstream 34368 35874221 ~ 35905514 (-)
G2179798 NA non-coding upstream 49129 35888982 ~ 35892698 (-)
G2179847 NA non-coding upstream 57372 35897225 ~ 35897989 (-)
G2179850 NA non-coding upstream 73857 35913710 ~ 35914311 (-)
G2178372 NA other downstream 1029095 34792330 ~ 34809382 (-)
LOC110510135 LOC106563696 other downstream 1496585 34338911 ~ 34342460 (-)
G2177991 cfb other downstream 1691079 34092047 ~ 34216247 (-)
G2177695 NA other downstream 2326072 33511296 ~ 33512326 (-)
G2176363 NA other downstream 3193826 32643402 ~ 32644572 (-)
G2179862 NA other upstream 122131 35961984 ~ 35962832 (-)
LOC110510209 LOC106563761 other upstream 664620 36499597 ~ 36596534 (-)
G2180120 NA other upstream 666687 36506540 ~ 36507120 (-)
LOC110509384 NA other upstream 1137301 36975909 ~ 36979761 (-)
G2180587 NA other upstream 1142104 36981957 ~ 36982709 (-)

Expression


Co-expression Network