G2179803


Basic Information

Item Value
gene id G2179803
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 35874221 ~ 35905514 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2491551
tactacatagagccatgactacatggaactctattccacagtactacatagagccatgactacatggaactctattccacagtactacataaagccatgactacatggaactctattccacagtactacatagagccatgactacatggaactctattccacagtactacatagagccatgactacatggaactctattccacagtactacatagagccatgactacatggaactctattccacagtactacatagccatgactacatggaactctattccacagtactacatagagccatgactacatggaactctattccacaatactacatagagccatgactacatggaactctattccacagtactacatagccatgactacatggaactctatttcacagtactacatagagccatgactacatggaactctattccacagtactacatagagccatgactacatggaactctattccacagtactacatagccatgactacatggaactctattccacaatactacatagagccatgactacatggaactctattccacagtactacatagagccatgactacatggaactctattccacatcaaataactgacgcaagcagtacaATTTAGATTCAAAAAACACTATGAAACAACGGgtactgtgaagcaacacaaacataggcacagacacatgcatacacacacatacgataacatacgcactatacatacacatggatttagtaatgtacagttgaagtcggaagtttacatacaccttagcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2491551 True 794 lncRNA 0.40 2 35874221 35905514

Neighbor

gene id symbol gene type direction distance location
LOC110510227 LOC106563788 coding downstream 2704 35841143 ~ 35871517 (-)
LOC110510228 LOC106563789 coding downstream 56729 35804621 ~ 35817492 (-)
LOC110510180 tcof coding downstream 350154 35507047 ~ 35524067 (-)
ik ik coding downstream 368505 35495285 ~ 35505716 (-)
LOC110510173 LOC106563748 coding downstream 419696 35421966 ~ 35454525 (-)
supt6h LOC106602907 coding upstream 5514 35911028 ~ 35950373 (-)
LOC118945335 NA coding upstream 29846 35935360 ~ 35936556 (-)
LOC118945336 NA coding upstream 31230 35936744 ~ 35937921 (-)
LOC110509452 LOC106563653 coding upstream 63942 35969456 ~ 36032625 (-)
nf2b LOC106563816 coding upstream 219501 36125015 ~ 36147223 (-)
G2179829 NA non-coding downstream 13817 35860000 ~ 35860404 (-)
G2179806 NA non-coding downstream 34368 35838398 ~ 35839853 (-)
G2179379 NA non-coding downstream 70627 35803344 ~ 35803594 (-)
G2179376 NA non-coding downstream 72652 35801334 ~ 35801569 (-)
G2179850 NA non-coding upstream 8196 35913710 ~ 35914311 (-)
G2179856 NA non-coding upstream 47890 35953404 ~ 35955677 (-)
G2179861 NA non-coding upstream 55690 35961204 ~ 35962276 (-)
G2179902 NA non-coding upstream 133889 36039403 ~ 36096507 (-)
G2179924 NA non-coding upstream 174870 36080384 ~ 36080677 (-)
G2178372 NA other downstream 1064918 34792330 ~ 34809382 (-)
LOC110510135 LOC106563696 other downstream 1532408 34338911 ~ 34342460 (-)
G2177991 cfb other downstream 1726902 34092047 ~ 34216247 (-)
G2177695 NA other downstream 2361895 33511296 ~ 33512326 (-)
G2176363 NA other downstream 3229649 32643402 ~ 32644572 (-)
G2179862 NA other upstream 56470 35961984 ~ 35962832 (-)
LOC110510209 LOC106563761 other upstream 598959 36499597 ~ 36596534 (-)
G2180120 NA other upstream 601026 36506540 ~ 36507120 (-)
LOC110509384 NA other upstream 1071640 36975909 ~ 36979761 (-)
G2180587 NA other upstream 1076443 36981957 ~ 36982709 (-)

Expression


Co-expression Network