G2179850



Basic Information


Item Value
gene id G2179850
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 35913710 ~ 35914311 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2491600
GGGAACACAACATTAGTCtctgcggagggagggagggagagagcagcagagggtctgcctctcacggtctctgctctctccttcctttcctctgatTAGACTTGACCAGAAAGGGGAACACAGTTCACCTGGTGGTTGAGGCTCGAATCGCACCGCATCTGCATTAGTCAGGCACAAATTCATGTTCcaatgaccagagaaagtgaaatactCCTCGGTATTAAAATATCCATGACGAGCTTCTAATAATCTTAAAAGCGCCG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2491600 True 263 lncRNA 0.49 2 35913710 35914311

Neighbor


gene id symbol gene type direction distance location
LOC110510226 NA coding downstream 20976 35887991 ~ 35892734 (-)
LOC118945690 NA coding downstream 21326 35892318 ~ 35892384 (-)
LOC118945706 NA coding downstream 21994 35891642 ~ 35891716 (-)
LOC118945703 NA coding downstream 22264 35891372 ~ 35891446 (-)
LOC118945692 NA coding downstream 22599 35891022 ~ 35891111 (-)
LOC118945335 NA coding upstream 21049 35935360 ~ 35936556 (-)
LOC118945336 NA coding upstream 22433 35936744 ~ 35937921 (-)
LOC110509452 LOC106563653 coding upstream 55145 35969456 ~ 36032625 (-)
nf2b LOC106563816 coding upstream 210704 36125015 ~ 36147223 (-)
LOC110510222 LOC106563811 coding upstream 248838 36163149 ~ 36165830 (-)
G2179803 NA non-coding downstream 8196 35874221 ~ 35905514 (-)
G2179847 NA non-coding downstream 15721 35897225 ~ 35897989 (-)
G2179798 NA non-coding downstream 21012 35888982 ~ 35892698 (-)
G2179829 NA non-coding downstream 53306 35860000 ~ 35860404 (-)
G2179806 NA non-coding downstream 73857 35838398 ~ 35839853 (-)
G2179856 NA non-coding upstream 39093 35953404 ~ 35955677 (-)
G2179861 NA non-coding upstream 46893 35961204 ~ 35962276 (-)
G2179902 NA non-coding upstream 125092 36039403 ~ 36096507 (-)
G2179924 NA non-coding upstream 166073 36080384 ~ 36080677 (-)
G2179961 NA non-coding upstream 241904 36156215 ~ 36158086 (-)
G2178372 NA other downstream 1104407 34792330 ~ 34809382 (-)
LOC110510135 LOC106563696 other downstream 1571897 34338911 ~ 34342460 (-)
G2177991 cfb other downstream 1766391 34092047 ~ 34216247 (-)
G2177695 NA other downstream 2401384 33511296 ~ 33512326 (-)
G2176363 NA other downstream 3269138 32643402 ~ 32644572 (-)
G2179862 NA other upstream 47673 35961984 ~ 35962832 (-)
LOC110510209 LOC106563761 other upstream 590162 36499597 ~ 36596534 (-)
G2180120 NA other upstream 592229 36506540 ~ 36507120 (-)
LOC110509384 NA other upstream 1062843 36975909 ~ 36979761 (-)
G2180587 NA other upstream 1067646 36981957 ~ 36982709 (-)

Expression



Co-expression Network