Gene
RNA
| Item | Value |
|---|---|
| gene id | G2179924 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 36080384 ~ 36080677 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2491690 | False | 245 | lncRNA | 0.46 | 2 | 36080384 | 36080677 |
| TU2491691 | True | 246 | lncRNA | 0.46 | 2 | 36080384 | 36080677 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509452 | LOC106563653 | coding | downstream | 47759 | 35969456 ~ 36032625 (-) |
| supt6h | LOC106602907 | coding | downstream | 130011 | 35911028 ~ 35950373 (-) |
| LOC118945336 | NA | coding | downstream | 142463 | 35936744 ~ 35937921 (-) |
| LOC118945335 | NA | coding | downstream | 143828 | 35935360 ~ 35936556 (-) |
| LOC118945690 | NA | coding | downstream | 188000 | 35892318 ~ 35892384 (-) |
| nf2b | LOC106563816 | coding | upstream | 44338 | 36125015 ~ 36147223 (-) |
| LOC110510222 | LOC106563811 | coding | upstream | 82472 | 36163149 ~ 36165830 (-) |
| LOC110510224 | LOC106563813 | coding | upstream | 111426 | 36192103 ~ 36194036 (-) |
| LOC110510219 | LOC106563810 | coding | upstream | 114732 | 36195409 ~ 36196374 (-) |
| LOC110510218 | LOC106563809 | coding | upstream | 120091 | 36200768 ~ 36221187 (-) |
| G2179861 | NA | non-coding | downstream | 118108 | 35961204 ~ 35962276 (-) |
| G2179856 | NA | non-coding | downstream | 124707 | 35953404 ~ 35955677 (-) |
| G2179850 | NA | non-coding | downstream | 166073 | 35913710 ~ 35914311 (-) |
| G2179847 | NA | non-coding | downstream | 182395 | 35897225 ~ 35897989 (-) |
| G2179798 | NA | non-coding | downstream | 187686 | 35888982 ~ 35892698 (-) |
| G2179961 | NA | non-coding | upstream | 75538 | 36156215 ~ 36158086 (-) |
| G2180042 | NA | non-coding | upstream | 215833 | 36296510 ~ 36296984 (-) |
| G2180062 | NA | non-coding | upstream | 249835 | 36330512 ~ 36330737 (-) |
| G2180066 | LOC106563774 | non-coding | upstream | 277483 | 36358160 ~ 36359289 (-) |
| G2180067 | NA | non-coding | upstream | 278723 | 36359400 ~ 36377438 (-) |
| G2179862 | NA | other | downstream | 117552 | 35961984 ~ 35962832 (-) |
| G2178372 | NA | other | downstream | 1271081 | 34792330 ~ 34809382 (-) |
| LOC110510135 | LOC106563696 | other | downstream | 1738571 | 34338911 ~ 34342460 (-) |
| G2177991 | cfb | other | downstream | 1933065 | 34092047 ~ 34216247 (-) |
| G2177695 | NA | other | downstream | 2568058 | 33511296 ~ 33512326 (-) |
| LOC110510209 | LOC106563761 | other | upstream | 423796 | 36499597 ~ 36596534 (-) |
| G2180120 | NA | other | upstream | 425863 | 36506540 ~ 36507120 (-) |
| LOC110509384 | NA | other | upstream | 896477 | 36975909 ~ 36979761 (-) |
| G2180587 | NA | other | upstream | 901280 | 36981957 ~ 36982709 (-) |
| G2181143 | LOC100136155 | other | upstream | 1152192 | 37232869 ~ 37233899 (-) |
