G2180110


Basic Information

Item Value
gene id G2180110
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 36468573 ~ 36469873 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2491907
agattgaactctttggactgaatgccaagcgtcacgtcttaaggaaacctggcatcatccctacagttaagcgtggtggcagcatcatgctgtgggcatgtttttctgtggcagggactgtgagactagtcaggattggggGAAGATGAACATGgaaaagtacagcgagatccttgatgaaaacctactccagagcactcaggacctcagactggggcgaaggttcaccttccaacacgacaatgaccccaagcacacagccaagacaacgcagatgTAActttaggacaagtctctgaatgtccttgagtggccaagccagagccccgacttgaacccaatcgaatatctctagagagacctAAAATAGCTCCAGTTGCAGAGAAGATtgagagaaactccccacatacaggtgtgccaagcttgtagcatcacacccaagaagactcgaggctgtaatcactgccaaaggtgcttcaacaaagtactgactaaagggtctgaatacttatatttcagtttttatatttaatgcatttgcaaaaaaaatctaaaatcctgtttttgctttgttattataggatattgtgtgtagattgatgaggggaaaaacaattgaatccattttagagtaaggatgtaacataacaaaatgtgaaataaataattcaatcATTTTTCGATTTCATTGTATTTCAATTGTGAATTCCAGCAACCTATCTTGACAGACGATATCATATAATTTGACCACATTGGTGCATTTGTTACAATAATAATCCACATAAAATACAGTAATCTGTTAAATTAGAGACCTGTAGGAAAGTGTAGACATATTATAAAAAACTGAGATGATGGGAAATTGAATGAGAGATGGTTGATCTTGGTCTATTGGAAGATTTGGCATGCTTCATTTAGCAGAGAGCGCGGTTTTAGAGACAGGTTTGTTTTTTTTATAGGTGGGACTTTTTTTTGCAGAAAGTACAGATTGGCTCCTCAGATATTGTTTCTCAAAACCAATCTCATAATATTTGCGAGGACTTAAAACCTACTTTAAGAAGGCAAACACATGTAATTTAGGTGCACATCCAAGTGCTATCCACCCTGGGGTTTTTGGTAATGAGCACTTTTGGTATTTGGTATATTATTAGGaccccattagctgttgtgaaagaggcagcttctcttcctggagaaaacatgacataatacagaacagtaatagacaagaacagctcaaggacagaattacatacattttaaaatgacccacacagcctacatatcaacacatactgtacacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2491907 True 1301 lncRNA 0.39 1 36468573 36469873

Neighbor

gene id symbol gene type direction distance location
LOC110510211 LOC106563768 coding downstream 5125 36453928 ~ 36463448 (-)
sumf2 sumf2 coding downstream 20704 36424410 ~ 36447869 (-)
bicdl2l LOC106563772 coding downstream 73803 36385268 ~ 36394770 (-)
LOC110510218 LOC106563809 coding downstream 247386 36200768 ~ 36221187 (-)
LOC110510217 LOC106592238 coding downstream 257099 36210084 ~ 36211474 (-)
LOC110510210 akt2 coding upstream 2919 36472792 ~ 36488924 (-)
LOC110510209 LOC106563761 coding upstream 29724 36499597 ~ 36596534 (-)
LOC110510208 LOC106563760 coding upstream 174075 36643948 ~ 36663311 (-)
gfpt2 LOC106563757 coding upstream 195129 36665002 ~ 36682231 (-)
LOC110510204 LOC106563756 coding upstream 214193 36683012 ~ 36693105 (-)
G2180103 NA non-coding downstream 17247 36451116 ~ 36451326 (-)
G2180102 NA non-coding downstream 18267 36450016 ~ 36450306 (-)
G2180095 NA non-coding downstream 45461 36422906 ~ 36423112 (-)
G2180094 NA non-coding downstream 64527 36402173 ~ 36404046 (-)
G2180086 NA non-coding downstream 72784 36395470 ~ 36395789 (-)
G2180112 NA non-coding upstream 19739 36489612 ~ 36489898 (-)
G2180114 NA non-coding upstream 27315 36497188 ~ 36497491 (-)
G2180121 NA non-coding upstream 47461 36517334 ~ 36519604 (-)
G2180150 NA non-coding upstream 94951 36564824 ~ 36567413 (-)
G2179862 NA other downstream 505741 35961984 ~ 35962832 (-)
G2178372 NA other downstream 1659270 34792330 ~ 34809382 (-)
LOC110510135 LOC106563696 other downstream 2126760 34338911 ~ 34342460 (-)
G2177991 cfb other downstream 2321254 34092047 ~ 34216247 (-)
G2177695 NA other downstream 2956247 33511296 ~ 33512326 (-)
G2180120 NA other upstream 36667 36506540 ~ 36507120 (-)
LOC110509384 NA other upstream 507281 36975909 ~ 36979761 (-)
G2180587 NA other upstream 512084 36981957 ~ 36982709 (-)
G2181143 LOC100136155 other upstream 762996 37232869 ~ 37233899 (-)

Expression


Co-expression Network