Gene
RNA
| Item | Value |
|---|---|
| gene id | G2180114 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 36497188 ~ 36497491 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| NACHT, LRR and PYD domains-containing protein 1-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2491911 | True | 304 | lncRNA | 0.38 | 1 | 36497188 | 36497491 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110510210 | akt2 | coding | downstream | 8264 | 36472792 ~ 36488924 (-) |
| LOC110510211 | LOC106563768 | coding | downstream | 33740 | 36453928 ~ 36463448 (-) |
| sumf2 | sumf2 | coding | downstream | 49319 | 36424410 ~ 36447869 (-) |
| bicdl2l | LOC106563772 | coding | downstream | 102418 | 36385268 ~ 36394770 (-) |
| LOC110510217 | LOC106592238 | coding | downstream | 285714 | 36210084 ~ 36211474 (-) |
| LOC110510209 | LOC106563761 | coding | upstream | 2106 | 36499597 ~ 36596534 (-) |
| LOC110510208 | LOC106563760 | coding | upstream | 146457 | 36643948 ~ 36663311 (-) |
| gfpt2 | LOC106563757 | coding | upstream | 167511 | 36665002 ~ 36682231 (-) |
| LOC110510204 | LOC106563756 | coding | upstream | 186575 | 36683012 ~ 36693105 (-) |
| LOC118936290 | LOC106563755 | coding | upstream | 196743 | 36694234 ~ 36697607 (-) |
| G2180112 | NA | non-coding | downstream | 7290 | 36489612 ~ 36489898 (-) |
| G2180110 | NA | non-coding | downstream | 27315 | 36468573 ~ 36469873 (-) |
| G2180103 | NA | non-coding | downstream | 45862 | 36451116 ~ 36451326 (-) |
| G2180102 | NA | non-coding | downstream | 46882 | 36450016 ~ 36450306 (-) |
| G2180095 | NA | non-coding | downstream | 74076 | 36422906 ~ 36423112 (-) |
| G2180121 | NA | non-coding | upstream | 19843 | 36517334 ~ 36519604 (-) |
| G2180150 | NA | non-coding | upstream | 67333 | 36564824 ~ 36567413 (-) |
| G2180177 | NA | non-coding | upstream | 104702 | 36602193 ~ 36602486 (-) |
| G2179862 | NA | other | downstream | 534356 | 35961984 ~ 35962832 (-) |
| G2178372 | NA | other | downstream | 1687885 | 34792330 ~ 34809382 (-) |
| LOC110510135 | LOC106563696 | other | downstream | 2155375 | 34338911 ~ 34342460 (-) |
| G2177991 | cfb | other | downstream | 2349869 | 34092047 ~ 34216247 (-) |
| G2177695 | NA | other | downstream | 2984862 | 33511296 ~ 33512326 (-) |
| G2180120 | NA | other | upstream | 9049 | 36506540 ~ 36507120 (-) |
| LOC110509384 | NA | other | upstream | 479663 | 36975909 ~ 36979761 (-) |
| G2180587 | NA | other | upstream | 484466 | 36981957 ~ 36982709 (-) |
| G2181143 | LOC100136155 | other | upstream | 735378 | 37232869 ~ 37233899 (-) |
