G2180121


Basic Information

Item Value
gene id G2180121
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 36517334 ~ 36519604 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2491945
GTGAATGTGTAAATGTCCCAGTTAACAGCAGCTTGGCAGGAGTACATGTCACTGGAATTGTACTATACTGTAGCAGCTGTTTGGGCCTGTGTTGTGTTGCCTCTCCTGACCTTGGATGTGAATTAAAGCTCTTGGAGCAGTGTAGACATCTGGCAGAGCCCAGCGTAGAGCACATGTGGATGACTGACCCATCGGACACTGGACTCCTTACTGTTGGGCTCCTTACTGTTGTCCTCTCTGCCGGGGTCAAGGCAAGTAGCACCGCGGTTAGTCATGTTCATATATCTCTATTAAGAAGCAATTAGTTTACCATCAATTACTCTCAGCTATTAACATACTTTACACATGAGTtcatttttatattgtgttgttgaggCAGATGCAATGATGTGTTCGAGACCCCCTAAAGACGGGGGGACGGGGGGACCGAGTCAAGGCCGGAACCGGGAGGGGGGCGAGGGGTCTGAGACCAAGTAAATTGTAATTGCTTCAAATCGCGACTATAATAAGAGTTCAACAagtccagtatttctgtgttcatatttcagcaGAATTCTTTAGAATGGTGAAAAGAATGCAGAGCCACTATAAATGATCCCTGACCCAAACAGGTTTATAAATGATCCCTGACCCAAACAAGTTTATAAATGATCCCTGACCCAAACAGTTTTATAAATGATCCCTGACCCAAACAGGTTTATAAATGATCCCTGACCCAAACAGGTTTATAAATGATCACTGACCCAAACAGGTTTATAAATGATCCCTGACCCAAACAGGTTTATAAATGATCCCTGACCCAAACAGGTTTATAAATGATCCCTGACCCAAACAGGATTATAAATGATTGCTGACCCAAACAGGTTTATAAATGATCCCTGACCCAAACAGGTTTATAAATGATCACTGACCCAAACAGGTTtatattaaaaacattttttttaaacaatatacactgagaatacaaaactttaggaacaccatagactgaccaggtgaatccaggtgaaatatatgatcccttattaacgtcacttgttaaatccacttcaatcagtgtagatgaaggggaggagacaagttaaagaaggatttttaagccttgagacaattgagaaatgaattgtgtatgtgtgccattcaggggatgaatgggcaagaaaaaagatgtaagtgtctttgaacagggtatggtagtaggtgccaggcgcaccggtttgtgtcaagaactgcaacgctgctgggtttttcacgctcaacagtttcctgtgtgtatcaaaaatggtccaccacccaaagctcatccagtcaacttgatacaactgcgggaagcattggagtcaacatgggccagcatccctgtggaacgcttgcgacaccttttagagtccatgcccagatgaattgagggggtgcaactcaatattaggaaggtgttcctaatgttttgtgcactcagtgtatgtaacaaTTTCCCCCGGTCTCCCCTAATAATACTGAGCTTGCAACTTTCAAACAATTTCCCCCATTCTTCCCTACTAGGGAATCAAGGACATTCTGAAGAGCGCAACAAAGTTTAAGGATATTTTTCAACAAAAGTATAGGACATTAATGTTACTAGTGAAGTAGGAAGCCCGGGTTTCAATAGGCAATAAGTTATGAATGGGTCATGAGGGAGTGTGGATATTTGGCCTGTCGAAGTGGTTTTACGAGCTGAATGAATGGGAGCtgataattattataattttttactcGGGAAGACATGAGTTCTCATTGTCCGAGTAAAAATGTATCTGACACAGAGACAAGACAGAAAAACTCAATATGTGGTCTTGAATACTACAACACTGAGCATATGCATTCCATTCAATCTGgagccctctctgtctgtctcaaagTTGTTTCTGGCCTGGTTTCCATTTGAGTTCATTGTTTCCTAGTCGGCAGTCCAAAGGGACTCTTAAGGAATAAGTACTTTAGAGTTCATAATATTAGACATAGGAGGGCACCGTTATGCTATTTTAGCACTTCATTGTGTATGTGAATTCACAGGAGGGTGTCCGTACAGGAGGGTGTCCATACAGGAGGGTGTCCATACAGGAGGGTGTCCATACAGGAGGGTGTCCGTACAGGAGGGTGTCCGTACAGAGGGGTGTCCGTACAGGAGGGTGTCCGTACAGGGGGGTG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2491945 True 2187 lncRNA 0.43 2 36517334 36519604

Neighbor

gene id symbol gene type direction distance location
LOC110510210 akt2 coding downstream 28410 36472792 ~ 36488924 (-)
LOC110510211 LOC106563768 coding downstream 53886 36453928 ~ 36463448 (-)
sumf2 sumf2 coding downstream 69465 36424410 ~ 36447869 (-)
bicdl2l LOC106563772 coding downstream 122564 36385268 ~ 36394770 (-)
LOC110510217 LOC106592238 coding downstream 305860 36210084 ~ 36211474 (-)
LOC110510208 LOC106563760 coding upstream 124344 36643948 ~ 36663311 (-)
gfpt2 LOC106563757 coding upstream 145398 36665002 ~ 36682231 (-)
LOC110510204 LOC106563756 coding upstream 164462 36683012 ~ 36693105 (-)
LOC118936290 LOC106563755 coding upstream 174630 36694234 ~ 36697607 (-)
LOC110510203 LOC106602921 coding upstream 186283 36705887 ~ 36795455 (-)
LOC110510209 LOC106563761 non-coding downstream 9005 36499597 ~ 36596534 (-)
G2180114 NA non-coding downstream 19843 36497188 ~ 36497491 (-)
G2180112 NA non-coding downstream 27436 36489612 ~ 36489898 (-)
G2180110 NA non-coding downstream 47461 36468573 ~ 36469873 (-)
G2180103 NA non-coding downstream 66008 36451116 ~ 36451326 (-)
G2180150 NA non-coding upstream 45220 36564824 ~ 36567413 (-)
G2180177 NA non-coding upstream 82589 36602193 ~ 36602486 (-)
G2180417 NA non-coding upstream 179105 36698709 ~ 36699060 (-)
G2180420 NA non-coding upstream 181921 36701525 ~ 36701818 (-)
G2180120 NA other downstream 10214 36506540 ~ 36507120 (-)
G2179862 NA other downstream 554502 35961984 ~ 35962832 (-)
G2178372 NA other downstream 1708031 34792330 ~ 34809382 (-)
LOC110510135 LOC106563696 other downstream 2175521 34338911 ~ 34342460 (-)
G2177991 cfb other downstream 2370015 34092047 ~ 34216247 (-)
LOC110509384 NA other upstream 457550 36975909 ~ 36979761 (-)
G2180587 NA other upstream 462353 36981957 ~ 36982709 (-)
G2181143 LOC100136155 other upstream 713265 37232869 ~ 37233899 (-)
LOC110510193 LOC106563731 other upstream 715189 37234793 ~ 37241163 (-)
nsrp1 nsrp1 other upstream 964044 37482837 ~ 37498898 (-)

Expression


Co-expression Network