Gene
RNA
| Item | Value |
|---|---|
| gene id | G2180588 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 36995149 ~ 36995363 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: macrophage mannose receptor 1-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2492476 | True | 215 | lncRNA | 0.48 | 1 | 36995149 | 36995363 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509384 | NA | coding | downstream | 17473 | 36975909 ~ 36979761 (-) |
| LOC110510199 | NA | coding | downstream | 32891 | 36952836 ~ 36962258 (-) |
| LOC110510200 | LOC106563752 | coding | downstream | 45027 | 36935309 ~ 36950122 (-) |
| LOC118945293 | NA | coding | downstream | 59815 | 36930273 ~ 36935334 (-) |
| LOC110510202 | cnot6 | coding | downstream | 153019 | 36832263 ~ 36842130 (-) |
| LOC110510195 | LOC106563727 | coding | upstream | 63831 | 37059194 ~ 37072763 (-) |
| LOC110510193 | LOC106563731 | coding | upstream | 239942 | 37234793 ~ 37241163 (-) |
| LOC110510188 | LOC106563734 | coding | upstream | 289005 | 37284368 ~ 37296541 (-) |
| LOC100136950 | m-csfr | coding | upstream | 308836 | 37304199 ~ 37314162 (-) |
| LOC118936394 | NA | coding | upstream | 322500 | 37317863 ~ 37318817 (-) |
| G2180579 | NA | non-coding | downstream | 34006 | 36960582 ~ 36961143 (-) |
| G2180575 | NA | non-coding | downstream | 37629 | 36957046 ~ 36957520 (-) |
| G2180539 | NA | non-coding | downstream | 96809 | 36897871 ~ 36898340 (-) |
| G2180443 | NA | non-coding | downstream | 164988 | 36828934 ~ 36830161 (-) |
| G2180589 | NA | non-coding | upstream | 8581 | 37003944 ~ 37004146 (-) |
| G2180590 | NA | non-coding | upstream | 10493 | 37005856 ~ 37022512 (-) |
| G2180591 | NA | non-coding | upstream | 12404 | 37007767 ~ 37025924 (-) |
| G2180592 | NA | non-coding | upstream | 46429 | 37041792 ~ 37042209 (-) |
| G2180593 | NA | non-coding | upstream | 47116 | 37042479 ~ 37042741 (-) |
| G2180587 | NA | other | downstream | 12440 | 36981957 ~ 36982709 (-) |
| LOC110510209 | LOC106563761 | other | downstream | 398776 | 36499597 ~ 36596534 (-) |
| G2180120 | NA | other | downstream | 488029 | 36506540 ~ 36507120 (-) |
| G2179862 | NA | other | downstream | 1032317 | 35961984 ~ 35962832 (-) |
| G2181143 | LOC100136155 | other | upstream | 237506 | 37232869 ~ 37233899 (-) |
| nsrp1 | nsrp1 | other | upstream | 488285 | 37482837 ~ 37498898 (-) |
| G2181304 | NA | other | upstream | 541302 | 37536665 ~ 37538240 (-) |
| G2181315 | NA | other | upstream | 785219 | 37780582 ~ 37787673 (-) |
