Gene
RNA
| Item | Value |
|---|---|
| gene id | G2180590 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 37005856 ~ 37022512 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: macrophage mannose receptor 1-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2492478 | True | 211 | lncRNA | 0.47 | 2 | 37005856 | 37022512 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509384 | NA | coding | downstream | 28180 | 36975909 ~ 36979761 (-) |
| LOC110510199 | NA | coding | downstream | 43598 | 36952836 ~ 36962258 (-) |
| LOC110510200 | LOC106563752 | coding | downstream | 55734 | 36935309 ~ 36950122 (-) |
| LOC118945293 | NA | coding | downstream | 70522 | 36930273 ~ 36935334 (-) |
| LOC110510202 | cnot6 | coding | downstream | 163726 | 36832263 ~ 36842130 (-) |
| LOC110510195 | LOC106563727 | coding | upstream | 36682 | 37059194 ~ 37072763 (-) |
| LOC110510193 | LOC106563731 | coding | upstream | 212793 | 37234793 ~ 37241163 (-) |
| LOC110510188 | LOC106563734 | coding | upstream | 261856 | 37284368 ~ 37296541 (-) |
| LOC100136950 | m-csfr | coding | upstream | 281687 | 37304199 ~ 37314162 (-) |
| LOC118936394 | NA | coding | upstream | 295351 | 37317863 ~ 37318817 (-) |
| G2180589 | NA | non-coding | downstream | 1710 | 37003944 ~ 37004146 (-) |
| G2180588 | NA | non-coding | downstream | 10493 | 36995149 ~ 36995363 (-) |
| G2180579 | NA | non-coding | downstream | 44713 | 36960582 ~ 36961143 (-) |
| G2180575 | NA | non-coding | downstream | 48336 | 36957046 ~ 36957520 (-) |
| G2180592 | NA | non-coding | upstream | 19280 | 37041792 ~ 37042209 (-) |
| G2180593 | NA | non-coding | upstream | 19967 | 37042479 ~ 37042741 (-) |
| G2180594 | NA | non-coding | upstream | 20654 | 37043166 ~ 37043370 (-) |
| G2180598 | NA | non-coding | upstream | 24775 | 37047287 ~ 37047539 (-) |
| G2180600 | NA | non-coding | upstream | 25779 | 37048291 ~ 37050622 (-) |
| G2180587 | NA | other | downstream | 23147 | 36981957 ~ 36982709 (-) |
| LOC110510209 | LOC106563761 | other | downstream | 409483 | 36499597 ~ 36596534 (-) |
| G2180120 | NA | other | downstream | 498736 | 36506540 ~ 36507120 (-) |
| G2179862 | NA | other | downstream | 1043024 | 35961984 ~ 35962832 (-) |
| G2181143 | LOC100136155 | other | upstream | 210357 | 37232869 ~ 37233899 (-) |
| nsrp1 | nsrp1 | other | upstream | 461136 | 37482837 ~ 37498898 (-) |
| G2181304 | NA | other | upstream | 514153 | 37536665 ~ 37538240 (-) |
| G2181315 | NA | other | upstream | 758070 | 37780582 ~ 37787673 (-) |
