Gene
RNA
| Item | Value |
|---|---|
| gene id | G2180591 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 37007767 ~ 37025924 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: macrophage mannose receptor 1-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2492479 | True | 278 | lncRNA | 0.45 | 3 | 37007767 | 37025924 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509384 | NA | coding | downstream | 30091 | 36975909 ~ 36979761 (-) |
| LOC110510199 | NA | coding | downstream | 45509 | 36952836 ~ 36962258 (-) |
| LOC110510200 | LOC106563752 | coding | downstream | 57645 | 36935309 ~ 36950122 (-) |
| LOC118945293 | NA | coding | downstream | 72433 | 36930273 ~ 36935334 (-) |
| LOC110510202 | cnot6 | coding | downstream | 165637 | 36832263 ~ 36842130 (-) |
| LOC110510195 | LOC106563727 | coding | upstream | 33270 | 37059194 ~ 37072763 (-) |
| LOC110510193 | LOC106563731 | coding | upstream | 209381 | 37234793 ~ 37241163 (-) |
| LOC110510188 | LOC106563734 | coding | upstream | 258444 | 37284368 ~ 37296541 (-) |
| LOC100136950 | m-csfr | coding | upstream | 278275 | 37304199 ~ 37314162 (-) |
| LOC118936394 | NA | coding | upstream | 291939 | 37317863 ~ 37318817 (-) |
| G2180589 | NA | non-coding | downstream | 3621 | 37003944 ~ 37004146 (-) |
| G2180588 | NA | non-coding | downstream | 12404 | 36995149 ~ 36995363 (-) |
| G2180592 | NA | non-coding | upstream | 15868 | 37041792 ~ 37042209 (-) |
| G2180593 | NA | non-coding | upstream | 16555 | 37042479 ~ 37042741 (-) |
| G2180594 | NA | non-coding | upstream | 17242 | 37043166 ~ 37043370 (-) |
| G2180598 | NA | non-coding | upstream | 21363 | 37047287 ~ 37047539 (-) |
| G2180600 | NA | non-coding | upstream | 22367 | 37048291 ~ 37050622 (-) |
| G2180587 | NA | other | downstream | 25058 | 36981957 ~ 36982709 (-) |
| LOC110510209 | LOC106563761 | other | downstream | 411394 | 36499597 ~ 36596534 (-) |
| G2180120 | NA | other | downstream | 500647 | 36506540 ~ 36507120 (-) |
| G2179862 | NA | other | downstream | 1044935 | 35961984 ~ 35962832 (-) |
| G2181143 | LOC100136155 | other | upstream | 206945 | 37232869 ~ 37233899 (-) |
| nsrp1 | nsrp1 | other | upstream | 457724 | 37482837 ~ 37498898 (-) |
| G2181304 | NA | other | upstream | 510741 | 37536665 ~ 37538240 (-) |
| G2181315 | NA | other | upstream | 754658 | 37780582 ~ 37787673 (-) |
