G2180600


Basic Information

Item Value
gene id G2180600
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 37048291 ~ 37050622 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2492490
TTTTGAATCAGCAGGTAAAACAAATGCTTCCATTGAGTAAGTGCCATTACGTGGTACGTTGCCTTGGGCAACAACCTGAGGGAGGAAGTGTCACATGGTTGTCATTACAAAACTACATGGCCTGCTTATGTAAGTTCGGAGCACGCCAGGATCAGATCTGACCTGTGTGGGAGTAATGGTGTTGACATCCTCGGATGATAGCTGTTTTAGCAGCGTTGTTTTGCCAGCGTTGTCTAGACCCAGGAGGACTATCCGAAGTTCCTGTTCTGTGGTTCCTTTTAATTTCTGTAGGACTGAAAAGAACCCCTTTTCAACTTCTCCCATGTTGAATGATGTGCTTCAGAAGGCAGGAAAGAGGACAGGGAATAGACAAAGCCTCATTCTATGATGAATCTTCAGAGTTGAGCACAGTGTTGTTCAGCAGGTACCCTGTAAATAGGCCTACAGATAGATCCTTGGTCCCCCT
>TU2492491
CTACTAATGACATGGTGGCCAGCAGAGAATAACCTCTGATTCTCCTGTGGGCTCTCAATTATTTTACTACATGAACAGAGTGAGAACTGGATACTTTCGACAGTGCAGACAGGCTGTACCACATGAAGAGGAATGGAACGTGAACTAACATTGAATGATGCCTTCAATATCTGTCTTGTAAATCCTAGAGGATGATACAGTACTGTTGTTATTTTATATCATGATACGGTGTCCATCTAACTTCATAAAACTGATATATTTTGAGAGAGATATTGTGGCCTACCTGTACACCCTCTCCAGAGACAGCTGAGCAGGCCTGGATCTGCCACGCCCGGTCGCGGTATGTGTGCAGGTTCAGGCCTTCTGCGATCTCGCTGGCGGGCGAGGCTGTGGCCAGGTCCTGCTTGTTAGCGAAGATGAGCACCGGAACCCCCTTCAGGTTCTCCTCATCAATCAGCTCTGATAGCTCCTGAGGGACCAAAGGACCAGTGTTATCCGACTCAGAGCTGAACAAAGTCTTGGAGACTACATCTCTGTGTTGCCAGCACTTAAAGATATTTCTTCCAGAAGGGTCGgatcttcctctgtcctccaatGTCCCACACGTTCAGTTTCATTCCGTGAGACGTGAGACTCTTAATGTTGAAGCCCTTTGGCATCAATGGAGAAGCAGAATTCATTGATCTAACACAGGTTAGCAAAACACAGCTTTATTCTGTTACAAGTGGCTCTAAATAAGCATTTATTTATGACATCATTTTATTAGAACCAAATCCTGACATGACCAGAAAGACAGGTACATTGATACAAAAC

Function

NR:

description
PREDICTED: ADP-ribosylation factor-like protein 3 isoform X2

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2492490 False 466 lncRNA 0.46 2 37048291 37048982
TU2492491 True 813 lncRNA 0.45 2 37049381 37050622

Neighbor

gene id symbol gene type direction distance location
LOC110509384 NA coding downstream 70615 36975909 ~ 36979761 (-)
LOC110510199 NA coding downstream 86033 36952836 ~ 36962258 (-)
LOC110510200 LOC106563752 coding downstream 98169 36935309 ~ 36950122 (-)
LOC118945293 NA coding downstream 112957 36930273 ~ 36935334 (-)
LOC110510202 cnot6 coding downstream 206161 36832263 ~ 36842130 (-)
LOC110510195 LOC106563727 coding upstream 8572 37059194 ~ 37072763 (-)
LOC110510193 LOC106563731 coding upstream 184683 37234793 ~ 37241163 (-)
LOC110510188 LOC106563734 coding upstream 233746 37284368 ~ 37296541 (-)
LOC100136950 m-csfr coding upstream 253577 37304199 ~ 37314162 (-)
LOC118936394 NA coding upstream 267241 37317863 ~ 37318817 (-)
G2180598 NA non-coding downstream 752 37047287 ~ 37047539 (-)
G2180594 NA non-coding downstream 4921 37043166 ~ 37043370 (-)
G2180593 NA non-coding downstream 5550 37042479 ~ 37042741 (-)
G2180592 NA non-coding downstream 6082 37041792 ~ 37042209 (-)
G2180591 NA non-coding downstream 22367 37007767 ~ 37025924 (-)
G2181041 NA non-coding upstream 20659 37071281 ~ 37071521 (-)
G2181060 NA non-coding upstream 47236 37097858 ~ 37111700 (-)
G2181151 NA non-coding upstream 150375 37200997 ~ 37201776 (-)
G2181157 NA non-coding upstream 156950 37207572 ~ 37210952 (-)
G2181158 NA non-coding upstream 165565 37216187 ~ 37216460 (-)
G2180587 NA other downstream 65582 36981957 ~ 36982709 (-)
LOC110510209 LOC106563761 other downstream 451918 36499597 ~ 36596534 (-)
G2180120 NA other downstream 541171 36506540 ~ 36507120 (-)
G2179862 NA other downstream 1085459 35961984 ~ 35962832 (-)
G2181143 LOC100136155 other upstream 182247 37232869 ~ 37233899 (-)
nsrp1 nsrp1 other upstream 433026 37482837 ~ 37498898 (-)
G2181304 NA other upstream 486043 37536665 ~ 37538240 (-)
G2181315 NA other upstream 729960 37780582 ~ 37787673 (-)

Expression


Co-expression Network