G2181143 (LOC100136155)


Basic Information

Item Value
gene id G2181143
gene name LOC100136155
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 37232869 ~ 37233899 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2493150
AGGATCTTACCGGATGTGGCGCCGCACCTAGCAGGCCCGCTGGTTACGGTGCCAGAGAGCTGCTTCCCACTGGCATCCACACACCAGCAAAGGGGTTTGTCGTTCAAGCACTGCTGGAGCAGGTAGTTGCCCTGCTCATCACACTGGGGTCGGAAGGATTCAATACTCACTGGCTTCAACCCTGTTGACTCCAGCTGACACTGCGTGGGAGAACCTGATCCTTCCTTTGGCCCTTGGGTAGATGTCCCCTCATCAACAGACTCATCGATCAGTAATGGCTTGGTGTTCATGGGCACATGCAGCTTCATGGGGACAGCAGCAGCGCGCCCTTGACTCAGCTCGTTCTTCAGGGATTTGCTCTCTTCCTGCAGGTCTTTAATGTCGTTCTTCTGGCCCAGGACGAAGTAGGCCGTCAGAGCCTGACCAGCAATGAGCAGGCAGGCCAAGAGGGTGAAACCAGCTATCTTGAAGGCCCTCTTGTTGGACCCTCTGTGAGGAGACAGAATATAGAAATTGAGAACATGATGGATACTTTATTGCTTTGTTATAAGTCTGATGGATGGGACTTTTCGTATAATTCCGCTATTACAGTAATCAATATAAATGTGTATGTGGC

Function

NR:

description
invariant chain-like protein 14-1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2493150 True 616 TUCP 0.51 4 37232869 37233899

Neighbor

gene id symbol gene type direction distance location
LOC110510195 LOC106563727 coding downstream 160106 37059194 ~ 37072763 (-)
LOC110509384 NA coding downstream 255193 36975909 ~ 36979761 (-)
LOC110510199 NA coding downstream 270611 36952836 ~ 36962258 (-)
LOC110510200 LOC106563752 coding downstream 282747 36935309 ~ 36950122 (-)
LOC118945293 NA coding downstream 297535 36930273 ~ 36935334 (-)
LOC110510193 LOC106563731 coding upstream 1406 37234793 ~ 37241163 (-)
LOC110510188 LOC106563734 coding upstream 50469 37284368 ~ 37296541 (-)
LOC100136950 m-csfr coding upstream 70300 37304199 ~ 37314162 (-)
LOC118936394 NA coding upstream 83964 37317863 ~ 37318817 (-)
LOC110509442 NA coding upstream 88774 37322235 ~ 37331174 (-)
G2181162 NA non-coding downstream 10759 37221895 ~ 37222110 (-)
G2181100 LOC100194652 non-coding downstream 12356 37218932 ~ 37220513 (-)
G2181158 NA non-coding downstream 16409 37216187 ~ 37216460 (-)
G2181157 NA non-coding downstream 21917 37207572 ~ 37210952 (-)
G2181151 NA non-coding downstream 31093 37200997 ~ 37201776 (-)
G2181182 NA non-coding upstream 42440 37276339 ~ 37276680 (-)
G2181184 NA non-coding upstream 45396 37279295 ~ 37279587 (-)
G2181200 NA non-coding upstream 81359 37315258 ~ 37315740 (-)
G2181201 NA non-coding upstream 82096 37315995 ~ 37316274 (-)
G2180587 NA other downstream 250160 36981957 ~ 36982709 (-)
LOC110510209 LOC106563761 other downstream 636496 36499597 ~ 36596534 (-)
G2180120 NA other downstream 725749 36506540 ~ 36507120 (-)
G2179862 NA other downstream 1270037 35961984 ~ 35962832 (-)
nsrp1 nsrp1 other upstream 249749 37482837 ~ 37498898 (-)
G2181304 NA other upstream 302766 37536665 ~ 37538240 (-)
G2181315 NA other upstream 546683 37780582 ~ 37787673 (-)
LOC110509458 LOC106592337 other upstream 926778 38160179 ~ 38237799 (-)

Expression


Co-expression Network