G2181200


Basic Information

Item Value
gene id G2181200
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 37315258 ~ 37315740 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2493220
tcagacttgattttcccatacaaaaaaatgtatcaacccttacaaaaatgtccattaattataatccacataataattcaaatttcctgttgctaataattcacatttcctgttcaCATTTTCTGTAAGTTTGCAGTATTGTAACTCTTATATTTGCCCCTCTCATTCTTATCAAATGCCTTACCAATTTAAAACTAAATTAAGTTTTGAATTATTGATTAAAAACATTAAGCACTACATTTTTATTTAGCATATATTTTGACAGGGAGTCGATGTTGAGACCAAGGTCTATTTAACAGATGAGCCTTGTTTAGCACAACAatacacatcaaaatacaatatGCACCTTAAATgacacattcatatacacattaaaatagacgttattatacacaacaatacacgtTAAGCAAACACAATCATAAACAGACACATTCTTCAGTGAAAAGGTCCCCTAACAACCTAGAGGCACCAGTTCCTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2493220 True 483 lncRNA 0.31 1 37315258 37315740

Neighbor

gene id symbol gene type direction distance location
LOC100136950 m-csfr coding downstream 1096 37304199 ~ 37314162 (-)
LOC110510188 LOC106563734 coding downstream 18717 37284368 ~ 37296541 (-)
LOC110510193 LOC106563731 coding downstream 74095 37234793 ~ 37241163 (-)
LOC110510195 LOC106563727 coding downstream 242495 37059194 ~ 37072763 (-)
LOC110509384 NA coding downstream 337582 36975909 ~ 36979761 (-)
LOC118936394 NA coding upstream 2123 37317863 ~ 37318817 (-)
LOC110509442 NA coding upstream 6933 37322235 ~ 37331174 (-)
LOC110510185 LOC106563738 coding upstream 68581 37384321 ~ 37388247 (-)
LOC110509383 LOC106563737 coding upstream 89207 37404947 ~ 37407196 (-)
nsrp1 nsrp1 coding upstream 176143 37482837 ~ 37498898 (-)
G2181184 NA non-coding downstream 35671 37279295 ~ 37279587 (-)
G2181182 NA non-coding downstream 38578 37276339 ~ 37276680 (-)
G2181162 NA non-coding downstream 93148 37221895 ~ 37222110 (-)
G2181100 LOC100194652 non-coding downstream 94745 37218932 ~ 37220513 (-)
G2181201 NA non-coding upstream 255 37315995 ~ 37316274 (-)
G2181204 NA non-coding upstream 3963 37319703 ~ 37319916 (-)
G2181205 NA non-coding upstream 4256 37319996 ~ 37320300 (-)
G2181210 NA non-coding upstream 10713 37326453 ~ 37326782 (-)
G2181143 LOC100136155 other downstream 81359 37232869 ~ 37233899 (-)
G2180587 NA other downstream 332549 36981957 ~ 36982709 (-)
G2180120 NA other downstream 808138 36506540 ~ 36507120 (-)
G2181304 NA other upstream 220925 37536665 ~ 37538240 (-)
G2181315 NA other upstream 464842 37780582 ~ 37787673 (-)
LOC110509458 LOC106592337 other upstream 844937 38160179 ~ 38237799 (-)
G2182508 NA other upstream 1598866 38914606 ~ 38914926 (-)

Expression


Co-expression Network