G2181228


Basic Information

Item Value
gene id G2181228
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 37449245 ~ 37449823 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2493300
agatctagctggtctgtcataatataatatacacagtatatctagctggtctgtcatattataatagagacagtagatctagctggtctgtcataatataatagatacagtagatctagctggtctgtcgtaagataatagagacacagggacagtagatctagctgttctgtcatgatataatggagacagtagatctagctggtctgtcataatataatagagagagtaggtctagctggtctgtgataatataatagagccagtagatcgagctgctctgtcataatataatagagacattagatctagctagtctgtcatattataatagagacagtagatctagcttgtatgtcataatttaatatacacagtagatcttgctggtctgtcataatataatagagacagcagatcaagctggtctgtcataatataatagagccagtatatctagatggtctttcataatataatagagccagtatatctatctggtctgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2493300 True 506 lncRNA 0.35 2 37449245 37449823

Neighbor

gene id symbol gene type direction distance location
LOC110509383 LOC106563737 coding downstream 42049 37404947 ~ 37407196 (-)
LOC110510185 LOC106563738 coding downstream 60998 37384321 ~ 37388247 (-)
LOC110509442 NA coding downstream 118071 37322235 ~ 37331174 (-)
LOC118936394 NA coding downstream 130428 37317863 ~ 37318817 (-)
LOC100136950 m-csfr coding downstream 135083 37304199 ~ 37314162 (-)
nsrp1 nsrp1 coding upstream 42060 37482837 ~ 37498898 (-)
LOC118945348 NA coding upstream 102748 37552571 ~ 37565815 (-)
LOC110510233 LOC106563796 coding upstream 180946 37627521 ~ 37656552 (-)
LOC118945268 NA coding upstream 215330 37665153 ~ 37668711 (-)
LOC110510234 LOC106563797 coding upstream 220886 37670709 ~ 37716255 (-)
G2181227 NA non-coding downstream 10318 37435442 ~ 37438927 (-)
G2181225 NA non-coding downstream 15092 37429225 ~ 37434153 (-)
G2181262 NA non-coding downstream 18356 37430026 ~ 37430889 (-)
G2181230 LOC106563735 non-coding downstream 93164 37351992 ~ 37356081 (-)
G2181222 NA non-coding downstream 99831 37349179 ~ 37349414 (-)
G2181224 NA non-coding upstream 1974 37451797 ~ 37455476 (-)
G2181265 NA non-coding upstream 32139 37481962 ~ 37491151 (-)
G2181280 NA non-coding upstream 49968 37499791 ~ 37500700 (-)
G2181284 NA non-coding upstream 53671 37503494 ~ 37503814 (-)
LOC110510193 LOC106563731 other downstream 209452 37234793 ~ 37241163 (-)
G2181143 LOC100136155 other downstream 215346 37232869 ~ 37233899 (-)
G2180587 NA other downstream 466536 36981957 ~ 36982709 (-)
LOC110509384 NA other downstream 469484 36975909 ~ 36979761 (-)
G2180120 NA other downstream 942125 36506540 ~ 36507120 (-)
G2181304 NA other upstream 86842 37536665 ~ 37538240 (-)
G2181315 NA other upstream 330759 37780582 ~ 37787673 (-)
LOC110509458 LOC106592337 other upstream 710854 38160179 ~ 38237799 (-)
G2182508 NA other upstream 1464783 38914606 ~ 38914926 (-)

Expression


Co-expression Network