G2181224


Basic Information

Item Value
gene id G2181224
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 37451797 ~ 37455476 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2493296
atctagctggtctgtcataataaaatagagacagcagatatagcttgtctgtcataatatagagacagtagatccagctggtctgtcattatttaatagagacagcatatctatctggtctgtcataatataagagacagtagatctagctgttctgtcataatataatagagacagtagatctagttggtctgtcataatataatagagacagtagatctagctggtctgtcataatataatagagacagtatatctagctggtctgtcatggtataatagagacagtagatctagttggtctgtcataatttaatagagacagcagatctagctggtctgtcataatataatagagacagtagatctagcaggtctgtcataatacaatagagacttcgagacagtagatctagctgttctgtcataatacaatagagacagtagatctagctggtctgtcataatacaatagagacagtagatctagttggtctgtcatgatacaatagagaaagtagatctagctggtctgtcataatataatagagacagtagatctagctggtctgtcataatataatagagacagtagatctagctgatctgtcataatttaatagaggcagcagatctagctggtctgtcataataaaatagagacagtagatctagctggtctgtcataataaaatagagacagcagatatagctggtctgtcataatataatagagacagtagatctagctggtctgtcataatataaattagacagtagatctagctggtctgtcataatttaatagaggcagcagatctagcttgtctgtcatattataatagagacagtagatctagctgttctgtcataatataatagagacagtatatctagctggtctgtaatagtataatagatacagtaaatctagctggtctgtcataataaaatagagacagtagatctagctggtctgtcataataaaatagagacagcagatattgctggtctgtcataatataatagagacagtagatccagctggtctgtcataatacaatagagacttagagacagtagatctagctggtctgtcataatataatagagacagtatatctagctggtctgtcatggtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2493296 True 1143 lncRNA 0.36 2 37451797 37455476

Neighbor

gene id symbol gene type direction distance location
LOC110509383 LOC106563737 coding downstream 44601 37404947 ~ 37407196 (-)
LOC110510185 LOC106563738 coding downstream 63550 37384321 ~ 37388247 (-)
LOC110509442 NA coding downstream 120623 37322235 ~ 37331174 (-)
LOC118936394 NA coding downstream 132980 37317863 ~ 37318817 (-)
LOC100136950 m-csfr coding downstream 137635 37304199 ~ 37314162 (-)
nsrp1 nsrp1 coding upstream 36407 37482837 ~ 37498898 (-)
LOC118945348 NA coding upstream 97095 37552571 ~ 37565815 (-)
LOC110510233 LOC106563796 coding upstream 175293 37627521 ~ 37656552 (-)
LOC118945268 NA coding upstream 209677 37665153 ~ 37668711 (-)
LOC110510234 LOC106563797 coding upstream 215233 37670709 ~ 37716255 (-)
G2181228 NA non-coding downstream 1974 37449245 ~ 37449823 (-)
G2181227 NA non-coding downstream 12870 37435442 ~ 37438927 (-)
G2181225 NA non-coding downstream 17644 37429225 ~ 37434153 (-)
G2181262 NA non-coding downstream 20908 37430026 ~ 37430889 (-)
G2181230 LOC106563735 non-coding downstream 95716 37351992 ~ 37356081 (-)
G2181265 NA non-coding upstream 26486 37481962 ~ 37491151 (-)
G2181280 NA non-coding upstream 44315 37499791 ~ 37500700 (-)
G2181284 NA non-coding upstream 48018 37503494 ~ 37503814 (-)
G2181285 NA non-coding upstream 48447 37503923 ~ 37504427 (-)
LOC110510193 LOC106563731 other downstream 212004 37234793 ~ 37241163 (-)
G2181143 LOC100136155 other downstream 217898 37232869 ~ 37233899 (-)
G2180587 NA other downstream 469088 36981957 ~ 36982709 (-)
LOC110509384 NA other downstream 472036 36975909 ~ 36979761 (-)
G2180120 NA other downstream 944677 36506540 ~ 36507120 (-)
G2181304 NA other upstream 81189 37536665 ~ 37538240 (-)
G2181315 NA other upstream 325106 37780582 ~ 37787673 (-)
LOC110509458 LOC106592337 other upstream 705201 38160179 ~ 38237799 (-)
G2182508 NA other upstream 1459130 38914606 ~ 38914926 (-)

Expression


Co-expression Network