Gene
RNA
| Item | Value |
|---|---|
| gene id | G2181570 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 38020233 ~ 38022204 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2493774 | True | 476 | lncRNA | 0.42 | 3 | 38020233 | 38022204 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110510239 | LOC106563649 | coding | upstream | 124119 | 37863719 ~ 37896114 (+) |
| LOC110510237 | LOC106563800 | coding | upstream | 166386 | 37847011 ~ 37853847 (+) |
| ovca2 | ovca2 | coding | upstream | 174015 | 37842546 ~ 37846218 (+) |
| LOC110510232 | coro6 | coding | upstream | 405516 | 37573805 ~ 37614717 (+) |
| LOC118945269 | LOC106563791 | coding | upstream | 472114 | 37546533 ~ 37548119 (+) |
| LOC110509457 | LOC106563780 | coding | downstream | 63314 | 38085518 ~ 38092927 (+) |
| LOC110509429 | LOC106563805 | coding | downstream | 471598 | 38493802 ~ 38494808 (+) |
| LOC110509430 | LOC106595428 | coding | downstream | 480344 | 38502548 ~ 38507876 (+) |
| LOC110509431 | LOC106563805 | coding | downstream | 500179 | 38522383 ~ 38523768 (+) |
| LOC110510114 | LOC106595428 | coding | downstream | 512202 | 38534406 ~ 38540364 (+) |
| G2181510 | NA | non-coding | upstream | 77083 | 37942284 ~ 37943150 (+) |
| G2181464 | NA | non-coding | upstream | 119019 | 37900980 ~ 37901214 (+) |
| G2181003 | NA | non-coding | upstream | 164155 | 37855384 ~ 37856078 (+) |
| G2181002 | NA | non-coding | upstream | 165320 | 37854122 ~ 37854913 (+) |
| G2181486 | NA | non-coding | downstream | 71905 | 38094109 ~ 38094335 (+) |
| G2181620 | NA | non-coding | downstream | 73591 | 38095795 ~ 38096025 (+) |
| G2181629 | NA | non-coding | downstream | 86532 | 38108736 ~ 38109134 (+) |
| G2181630 | NA | non-coding | downstream | 86959 | 38109163 ~ 38109363 (+) |
| G2181913 | NA | non-coding | downstream | 254509 | 38276713 ~ 38277490 (+) |
| G2180928 | NA | other | upstream | 314504 | 37705148 ~ 37705729 (+) |
| G2180897 | NA | other | upstream | 358018 | 37660587 ~ 37662215 (+) |
| G2180811 | NA | other | upstream | 598886 | 37417417 ~ 37468092 (+) |
| G2180382 | NA | other | upstream | 978048 | 37041723 ~ 37042185 (+) |
| G2180378 | NA | other | upstream | 1037619 | 36982346 ~ 36982614 (+) |
| G2181669 | NA | other | downstream | 151852 | 38174056 ~ 38184872 (+) |
| LOC110509461 | uspl1 | other | downstream | 775353 | 38760853 ~ 38819031 (+) |
| LOC110510244 | rxfp2 | other | downstream | 1055866 | 39077261 ~ 39261772 (+) |
| G2182716 | NA | other | downstream | 1187301 | 39209505 ~ 39210312 (+) |
| G2183108 | NA | other | downstream | 1538206 | 39560410 ~ 39563368 (+) |
