G2181980


Basic Information

Item Value
gene id G2181980
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 38354110 ~ 38363799 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2494359
ctagatctcctgtctctattgtattatgacagaccagctagatctactgtctctattatattatgacagaccagcgagatatactgcctctgttaaattatgacagaccagctagatctactgtctctattatattatgacagaccagtgagatatactgtctctattatattatgacagactagctagatctcctgtctctattatattatgaaagaccagctagatctactgtctctattatattatgacagaccagctagatctactgtctctattatattatgacagaacagctagatctactgtctcaattatgttatgacagaccagctagatctactgtctctattatattatgacagaccagctagatctactgtctctattgtattatgacagaacagctagatctactgtctctaggtcgctattatattatgacagacctgctagatctactgtctctattatattatgacataccagctagatctactgtctctattatatttgacagaccagctagatctactgtctctattgtattatgacagtccagctagatctcctgtctctattatattatgacagaccagctagatctactgtctctgttatactatgacagaccagctagatatactgtctctattatattatgaaagacaggctagatctactgtctctattatattatgacagaccagctagatctactgtctctattatattatgacagaacagctagatctactgtctctattatgttatgacagaccagctagaactactgcctctgttaaattatgagagaccagctagatctcctgtctctgttgtattatgacagaccagctagatctactgtctctattatattatgacagaccagcgagatatactgcctctgttaaattatgacagaccagctagatctactgtctctattatattatgacagacccgtgagataaactgtctctattatattatgacagaccagctagatctactgtctctattat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2494359 True 1028 lncRNA 0.36 2 38354110 38363799

Neighbor

gene id symbol gene type direction distance location
LOC110510241 LOC106563658 coding downstream 55783 38297234 ~ 38298327 (-)
LOC110509387 LOC106563658 coding downstream 83230 38269893 ~ 38270880 (-)
LOC110509458 LOC106592337 coding downstream 116311 38160179 ~ 38237799 (-)
LOC118945300 NA coding downstream 506158 37846047 ~ 37847952 (-)
LOC110510236 LOC106563799 coding downstream 573971 37751908 ~ 37780139 (-)
LOC110510112 LOC106563656 coding upstream 28738 38392537 ~ 38394321 (-)
LOC110510115 LOC106595428 coding upstream 84532 38448331 ~ 38454568 (-)
LOC110510113 LOC106563832 coding upstream 98868 38462667 ~ 38463617 (-)
LOC110509427 LOC106595428 coding upstream 106898 38470697 ~ 38477145 (-)
LOC110509428 LOC106563805 coding upstream 119588 38483387 ~ 38484577 (-)
G2181979 NA non-coding downstream 12433 38332834 ~ 38341677 (-)
G2181978 NA non-coding downstream 18007 38322794 ~ 38336103 (-)
G2181857 NA non-coding downstream 189120 38164603 ~ 38164990 (-)
G2181842 NA non-coding downstream 210428 38143483 ~ 38143682 (-)
G2181837 NA non-coding downstream 216377 38137523 ~ 38137733 (-)
G2181985 NA non-coding upstream 25702 38389501 ~ 38389719 (-)
G2181988 NA non-coding upstream 27465 38391264 ~ 38391591 (-)
G2181989 NA non-coding upstream 27836 38391635 ~ 38391859 (-)
G2181990 NA non-coding upstream 28275 38392074 ~ 38392382 (-)
G2181315 NA other downstream 566437 37780582 ~ 37787673 (-)
G2181304 NA other downstream 815870 37536665 ~ 37538240 (-)
nsrp1 nsrp1 other downstream 869460 37482837 ~ 37498898 (-)
LOC110510193 LOC106563731 other downstream 1114317 37234793 ~ 37241163 (-)
G2182508 NA other upstream 550807 38914606 ~ 38914926 (-)
G2182749 LOC106674859 other upstream 595840 38959639 ~ 38960457 (-)
LOC110509389 NA other upstream 995392 39359191 ~ 39370231 (-)
G2183255 NA other upstream 1185554 39549353 ~ 39549869 (-)
G2183279 NA other upstream 1229188 39592987 ~ 39594345 (-)

Expression


Co-expression Network