Gene
RNA
| Item | Value |
|---|---|
| gene id | G2182123 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 38453170 ~ 38475528 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2494521 | True | 315 | lncRNA | 0.37 | 2 | 38453170 | 38475528 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110510112 | LOC106563656 | coding | downstream | 58849 | 38392537 ~ 38394321 (-) |
| LOC110510241 | LOC106563658 | coding | downstream | 154843 | 38297234 ~ 38298327 (-) |
| LOC110509387 | LOC106563658 | coding | downstream | 182290 | 38269893 ~ 38270880 (-) |
| LOC110509458 | LOC106592337 | coding | downstream | 215371 | 38160179 ~ 38237799 (-) |
| LOC118945300 | NA | coding | downstream | 605218 | 37846047 ~ 37847952 (-) |
| LOC110509428 | LOC106563805 | coding | upstream | 7859 | 38483387 ~ 38484577 (-) |
| LOC110515723 | ubl3 | coding | upstream | 180099 | 38655627 ~ 38707017 (-) |
| LOC118945328 | NA | coding | upstream | 271602 | 38747130 ~ 38748239 (-) |
| katnal1 | katnal1 | coding | upstream | 274335 | 38749863 ~ 38776669 (-) |
| hmgb1a | hmgb1 | coding | upstream | 307557 | 38783085 ~ 38789254 (-) |
| G2182019 | NA | non-coding | downstream | 36032 | 38416789 ~ 38417138 (-) |
| G2182014 | NA | non-coding | downstream | 43665 | 38409178 ~ 38409505 (-) |
| G2181990 | NA | non-coding | downstream | 60788 | 38392074 ~ 38392382 (-) |
| G2181989 | NA | non-coding | downstream | 61311 | 38391635 ~ 38391859 (-) |
| G2182150 | LOC106592491 | non-coding | upstream | 28993 | 38504521 ~ 38537399 (-) |
| G2182179 | NA | non-coding | upstream | 89877 | 38565405 ~ 38579730 (-) |
| G2182300 | NA | non-coding | upstream | 119639 | 38595167 ~ 38595370 (-) |
| G2182304 | NA | non-coding | upstream | 134501 | 38610029 ~ 38610267 (-) |
| G2182310 | NA | non-coding | upstream | 155844 | 38631372 ~ 38631727 (-) |
| G2181315 | NA | other | downstream | 665497 | 37780582 ~ 37787673 (-) |
| G2181304 | NA | other | downstream | 914930 | 37536665 ~ 37538240 (-) |
| nsrp1 | nsrp1 | other | downstream | 968520 | 37482837 ~ 37498898 (-) |
| LOC110510193 | LOC106563731 | other | downstream | 1213377 | 37234793 ~ 37241163 (-) |
| G2182508 | NA | other | upstream | 439078 | 38914606 ~ 38914926 (-) |
| G2182749 | LOC106674859 | other | upstream | 484111 | 38959639 ~ 38960457 (-) |
| LOC110509389 | NA | other | upstream | 883663 | 39359191 ~ 39370231 (-) |
| G2183255 | NA | other | upstream | 1073825 | 39549353 ~ 39549869 (-) |
| G2183279 | NA | other | upstream | 1117459 | 39592987 ~ 39594345 (-) |
