G2182300



Basic Information


Item Value
gene id G2182300
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 38595167 ~ 38595370 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2494753
agtgtAGTCAGTGGCTAGCTAAGACAGAGAAAGGGGACTTCATGGAATGGGCACAGATTCTTGTTTGCTAATTAGCATTACAAAAAAAATTGTGGAGTAAATTGAGGCGAATACATTGAGAAaatcaccttgtcctagagagaatTACACTGTTATCAAAACttcatgccagggtaagcctacacgaaacacataCCTTATATG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2494753 True 204 lncRNA 0.39 1 38595167 38595370

Neighbor


gene id symbol gene type direction distance location
LOC110509428 LOC106563805 coding downstream 110590 38483387 ~ 38484577 (-)
LOC110509427 LOC106595428 coding downstream 118022 38470697 ~ 38477145 (-)
LOC110510113 LOC106563832 coding downstream 131550 38462667 ~ 38463617 (-)
LOC110510115 LOC106595428 coding downstream 140599 38448331 ~ 38454568 (-)
LOC110510112 LOC106563656 coding downstream 200846 38392537 ~ 38394321 (-)
LOC110515723 ubl3 coding upstream 60257 38655627 ~ 38707017 (-)
LOC118945328 NA coding upstream 151760 38747130 ~ 38748239 (-)
katnal1 katnal1 coding upstream 154493 38749863 ~ 38776669 (-)
hmgb1a hmgb1 coding upstream 187715 38783085 ~ 38789254 (-)
trnae-uuc-62 NA coding upstream 210212 38805582 ~ 38805653 (-)
G2182179 NA non-coding downstream 15437 38565405 ~ 38579730 (-)
G2182150 LOC106592491 non-coding downstream 57768 38504521 ~ 38537399 (-)
G2182123 NA non-coding downstream 119639 38453170 ~ 38475528 (-)
G2182124 NA non-coding downstream 137265 38456200 ~ 38457902 (-)
G2182019 NA non-coding downstream 178029 38416789 ~ 38417138 (-)
G2182304 NA non-coding upstream 14659 38610029 ~ 38610267 (-)
G2182310 NA non-coding upstream 36002 38631372 ~ 38631727 (-)
G2182316 NA non-coding upstream 45188 38640558 ~ 38640782 (-)
G2182321 NA non-coding upstream 51197 38646567 ~ 38646790 (-)
G2182323 NA non-coding upstream 63388 38658758 ~ 38659641 (-)
LOC110509458 LOC106592337 other downstream 420865 38160179 ~ 38237799 (-)
G2181315 NA other downstream 807494 37780582 ~ 37787673 (-)
G2181304 NA other downstream 1056927 37536665 ~ 37538240 (-)
nsrp1 nsrp1 other downstream 1110517 37482837 ~ 37498898 (-)
LOC110510193 LOC106563731 other downstream 1355374 37234793 ~ 37241163 (-)
G2182508 NA other upstream 319236 38914606 ~ 38914926 (-)
G2182749 LOC106674859 other upstream 364269 38959639 ~ 38960457 (-)
LOC110509389 NA other upstream 763821 39359191 ~ 39370231 (-)
G2183255 NA other upstream 953983 39549353 ~ 39549869 (-)
G2183279 NA other upstream 997617 39592987 ~ 39594345 (-)

Expression



Co-expression Network