Gene
RNA
| Item | Value |
|---|---|
| gene id | G2182331 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 38681344 ~ 38681780 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: collagen alpha-1(VI) chain-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2494792 | True | 361 | lncRNA | 0.41 | 2 | 38681344 | 38681780 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509428 | LOC106563805 | coding | downstream | 196767 | 38483387 ~ 38484577 (-) |
| LOC110509427 | LOC106595428 | coding | downstream | 204199 | 38470697 ~ 38477145 (-) |
| LOC110510113 | LOC106563832 | coding | downstream | 217727 | 38462667 ~ 38463617 (-) |
| LOC110510115 | LOC106595428 | coding | downstream | 226776 | 38448331 ~ 38454568 (-) |
| LOC110510112 | LOC106563656 | coding | downstream | 287023 | 38392537 ~ 38394321 (-) |
| LOC118945328 | NA | coding | upstream | 65350 | 38747130 ~ 38748239 (-) |
| katnal1 | katnal1 | coding | upstream | 68083 | 38749863 ~ 38776669 (-) |
| hmgb1a | hmgb1 | coding | upstream | 101305 | 38783085 ~ 38789254 (-) |
| trnae-uuc-62 | NA | coding | upstream | 123802 | 38805582 ~ 38805653 (-) |
| trnae-uuc-63 | NA | coding | upstream | 139762 | 38821542 ~ 38821613 (-) |
| G2182323 | NA | non-coding | downstream | 21703 | 38658758 ~ 38659641 (-) |
| G2182321 | NA | non-coding | downstream | 34554 | 38646567 ~ 38646790 (-) |
| G2182316 | NA | non-coding | downstream | 40562 | 38640558 ~ 38640782 (-) |
| G2182310 | NA | non-coding | downstream | 49617 | 38631372 ~ 38631727 (-) |
| G2182304 | NA | non-coding | downstream | 71077 | 38610029 ~ 38610267 (-) |
| G2182333 | NA | non-coding | upstream | 2977 | 38684757 ~ 38685385 (-) |
| G2182334 | NA | non-coding | upstream | 3396 | 38685176 ~ 38685661 (-) |
| G2182336 | NA | non-coding | upstream | 4870 | 38686650 ~ 38688594 (-) |
| G2182337 | NA | non-coding | upstream | 8786 | 38690566 ~ 38716534 (-) |
| G2182345 | NA | non-coding | upstream | 39799 | 38721579 ~ 38727402 (-) |
| LOC110509458 | LOC106592337 | other | downstream | 507042 | 38160179 ~ 38237799 (-) |
| G2181315 | NA | other | downstream | 893671 | 37780582 ~ 37787673 (-) |
| G2181304 | NA | other | downstream | 1143104 | 37536665 ~ 37538240 (-) |
| nsrp1 | nsrp1 | other | downstream | 1196694 | 37482837 ~ 37498898 (-) |
| LOC110510193 | LOC106563731 | other | downstream | 1441551 | 37234793 ~ 37241163 (-) |
| G2182508 | NA | other | upstream | 232826 | 38914606 ~ 38914926 (-) |
| G2182749 | LOC106674859 | other | upstream | 277859 | 38959639 ~ 38960457 (-) |
| LOC110509389 | NA | other | upstream | 677411 | 39359191 ~ 39370231 (-) |
| G2183255 | NA | other | upstream | 867573 | 39549353 ~ 39549869 (-) |
| G2183279 | NA | other | upstream | 911207 | 39592987 ~ 39594345 (-) |
