G2182336


Basic Information

Item Value
gene id G2182336
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 38686650 ~ 38688594 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2494797
GGGAGTGGGGGAGACGGAGGCAGAGGGGGACAGACGGAGGCAGAGGGGGACAGACGGAGagagacggaggcagagggatagacggagagagacggaggcagagggacagacggagagacagacggagGGTCAGGGAGTGGGGGGGACAGACGGAGGCAGGGGGACAGACGGAGGGTCAGGGAGTGGGGGAGACGGAGGCAGAGGGGGACAGACGGAGGCAGAGGGGGACAGACGGAGGCAGAGGGGGACAGACGGAGGCAGAGGGGGACAGacggaggcagagggacagacagagagacagacggagggtCAGGGAGTGGGGGGGACAGACGGAGGCAGAGGGGGACAGACGGAGTCAGAgggggacagacggagagagacggaggcagagggatagacggagagagacggaggcagagggacagacggagagacagacggagGGTCAGGGAGTGGGGGCGACAGACGGAGGCAGAGGGGGACAGACGGAGGCAGGGGGACAGACGGAGGGTCAGGGAGTGGGGGAGACGGAGGCAGAGGGGGACAGACGGAGGCAGAgggggacagacggagagagacggaggcagagggacagacggagagacagacgtAGGGTCAGGGATTGGGGGGGACAGACGGAGGCAGAgggggacagacggagagacagacggagGGTCAGGGAGTGGGGGAGACGGAGGCAGAGGGGGACAGACGGAGGCATAGGGGGACAGacggaggcagagggacagacggAGGGTCAGGGAGTGGGACAGACGGAGGCAGAGGGGGACAGACGGAGGCAGAGGGGGACAGACGGAGGCAGAgggggacagacggagagagtcggaggcagagggacagacggagagagacggaggcagagggacagacggagagacagacggag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2494797 True 907 lncRNA 0.67 4 38686650 38688594

Neighbor

gene id symbol gene type direction distance location
LOC110509428 LOC106563805 coding downstream 202073 38483387 ~ 38484577 (-)
LOC110509427 LOC106595428 coding downstream 209505 38470697 ~ 38477145 (-)
LOC110510113 LOC106563832 coding downstream 223033 38462667 ~ 38463617 (-)
LOC110510115 LOC106595428 coding downstream 232082 38448331 ~ 38454568 (-)
LOC110510112 LOC106563656 coding downstream 292329 38392537 ~ 38394321 (-)
LOC118945328 NA coding upstream 58536 38747130 ~ 38748239 (-)
katnal1 katnal1 coding upstream 61269 38749863 ~ 38776669 (-)
hmgb1a hmgb1 coding upstream 94491 38783085 ~ 38789254 (-)
trnae-uuc-62 NA coding upstream 116988 38805582 ~ 38805653 (-)
trnae-uuc-63 NA coding upstream 132948 38821542 ~ 38821613 (-)
G2182334 NA non-coding downstream 989 38685176 ~ 38685661 (-)
G2182333 NA non-coding downstream 1265 38684757 ~ 38685385 (-)
G2182328 NA non-coding downstream 2167 38673479 ~ 38684483 (-)
G2182331 NA non-coding downstream 4870 38681344 ~ 38681780 (-)
G2182323 NA non-coding downstream 27009 38658758 ~ 38659641 (-)
G2182337 NA non-coding upstream 1972 38690566 ~ 38716534 (-)
G2182345 NA non-coding upstream 32985 38721579 ~ 38727402 (-)
G2182351 NA non-coding upstream 45560 38734154 ~ 38751550 (-)
G2182392 NA non-coding upstream 119925 38808519 ~ 38809830 (-)
G2182402 NA non-coding upstream 144911 38833505 ~ 38833898 (-)
LOC110509458 LOC106592337 other downstream 512348 38160179 ~ 38237799 (-)
G2181315 NA other downstream 898977 37780582 ~ 37787673 (-)
G2181304 NA other downstream 1148410 37536665 ~ 37538240 (-)
nsrp1 nsrp1 other downstream 1202000 37482837 ~ 37498898 (-)
LOC110510193 LOC106563731 other downstream 1446857 37234793 ~ 37241163 (-)
G2182508 NA other upstream 226012 38914606 ~ 38914926 (-)
G2182749 LOC106674859 other upstream 271045 38959639 ~ 38960457 (-)
LOC110509389 NA other upstream 670597 39359191 ~ 39370231 (-)
G2183255 NA other upstream 860759 39549353 ~ 39549869 (-)
G2183279 NA other upstream 904393 39592987 ~ 39594345 (-)

Expression


Co-expression Network