Gene
RNA
| Item | Value |
|---|---|
| gene id | G2182510 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 38915946 ~ 38916175 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| tuftelin-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2494990 | True | 230 | lncRNA | 0.48 | 1 | 38915946 | 38916175 |
38,914,400
38,914,800
38,915,200
38,915,600
38,916,000
38,916,400
38,916,800
38,917,200
38,917,600
38,918,000
38,918,400
38,918,800
NC_048593.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118945332 | NA | coding | upstream | 41371 | 38872990 ~ 38874575 (+) |
| alox5ap | flap | coding | upstream | 87843 | 38821895 ~ 38828103 (+) |
| LOC110509461 | uspl1 | coding | upstream | 96915 | 38760853 ~ 38819031 (+) |
| LOC110509435 | LOC106604014 | coding | upstream | 266920 | 38641718 ~ 38649055 (+) |
| LOC110509433 | LOC106563807 | coding | upstream | 291374 | 38604915 ~ 38624572 (+) |
| LOC110510244 | rxfp2 | coding | downstream | 161086 | 39077261 ~ 39261772 (+) |
| LOC110509459 | NA | coding | downstream | 444745 | 39360920 ~ 39361495 (+) |
| zar1l | zar1l | coding | downstream | 455282 | 39371457 ~ 39373863 (+) |
| pds5b | NA | coding | downstream | 715089 | 39631264 ~ 39730848 (+) |
| LOC110521971 | LOC106593185 | coding | downstream | 828297 | 39744472 ~ 39748560 (+) |
| G2182500 | NA | non-coding | upstream | 8420 | 38907323 ~ 38907526 (+) |
| G2182417 | NA | non-coding | upstream | 10940 | 38847257 ~ 38905006 (+) |
| G2182446 | NA | non-coding | upstream | 20542 | 38895161 ~ 38895404 (+) |
| G2182416 | NA | non-coding | upstream | 68879 | 38846498 ~ 38847067 (+) |
| G2182406 | NA | non-coding | upstream | 79391 | 38836179 ~ 38836555 (+) |
| G2182521 | NA | non-coding | downstream | 11355 | 38927530 ~ 38927844 (+) |
| G2182530 | NA | non-coding | downstream | 17634 | 38933809 ~ 38934139 (+) |
| G2182538 | NA | non-coding | downstream | 25419 | 38941594 ~ 38941826 (+) |
| G2182539 | NA | non-coding | downstream | 25706 | 38941881 ~ 38942703 (+) |
| G2182556 | NA | non-coding | downstream | 37359 | 38953534 ~ 38955021 (+) |
| G2181669 | NA | other | upstream | 731074 | 38174056 ~ 38184872 (+) |
| G2180928 | NA | other | upstream | 1210217 | 37705148 ~ 37705729 (+) |
| G2180897 | NA | other | upstream | 1253731 | 37660587 ~ 37662215 (+) |
| G2180811 | NA | other | upstream | 1494599 | 37417417 ~ 37468092 (+) |
| G2182716 | NA | other | downstream | 293330 | 39209505 ~ 39210312 (+) |
| G2183108 | NA | other | downstream | 644235 | 39560410 ~ 39563368 (+) |
| LOC110521967 | LOC106595695 | other | downstream | 836862 | 39753017 ~ 39778819 (+) |
| stard13a | stard13 | other | downstream | 999983 | 39862811 ~ 39986975 (+) |
