Gene
RNA
| Item | Value |
|---|---|
| gene id | G2185874 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 42705949 ~ 42706265 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2499171 | True | 207 | lncRNA | 0.49 | 2 | 42705949 | 42706265 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509472 | LOC106563882 | coding | downstream | 98874 | 42162163 ~ 42661980 (-) |
| dchs1b | LOC105011153 | coding | downstream | 206170 | 42257886 ~ 42499779 (-) |
| arfip2b | arfip2 | coding | downstream | 569997 | 42077453 ~ 42135952 (-) |
| fhdc3 | LOC106563862 | coding | downstream | 639629 | 42043930 ~ 42066320 (-) |
| trim3b | LOC105011155 | coding | downstream | 669751 | 41894749 ~ 42036198 (-) |
| LOC118945309 | NA | coding | upstream | 27992 | 42734257 ~ 42740444 (-) |
| eva1c | LOC106563889 | coding | upstream | 43660 | 42749925 ~ 42775546 (-) |
| bach1b | bach1 | coding | upstream | 744063 | 43450328 ~ 43470242 (-) |
| map3k7cl | map3k7cl | coding | upstream | 771925 | 43478190 ~ 43513478 (-) |
| cadm2a | cadm2 | coding | upstream | 1108364 | 43814629 ~ 44580847 (-) |
| G2185868 | NA | non-coding | downstream | 5435 | 42699590 ~ 42700514 (-) |
| G2185863 | NA | non-coding | downstream | 15324 | 42689784 ~ 42690625 (-) |
| G2185861 | NA | non-coding | downstream | 22063 | 42683031 ~ 42683886 (-) |
| G2185859 | NA | non-coding | downstream | 26631 | 42678035 ~ 42679318 (-) |
| G2185854 | NA | non-coding | downstream | 28587 | 42667675 ~ 42677362 (-) |
| G2185883 | NA | non-coding | upstream | 38232 | 42744497 ~ 42744892 (-) |
| G2185885 | NA | non-coding | upstream | 39570 | 42745835 ~ 42746164 (-) |
| G2185896 | NA | non-coding | upstream | 41677 | 42747942 ~ 42749815 (-) |
| G2185902 | NA | non-coding | upstream | 66603 | 42772868 ~ 42774624 (-) |
| G2185525 | LOC106563877 | other | downstream | 852943 | 41852200 ~ 41853006 (-) |
| G2185427 | NA | other | downstream | 1110020 | 41595652 ~ 41595929 (-) |
| LOC110509471 | LOC106563870 | other | downstream | 1195548 | 41502509 ~ 41530610 (-) |
| sparta | spg20 | other | downstream | 1978935 | 40709409 ~ 40727062 (-) |
| ccdc169 | LOC106563839 | other | downstream | 1996863 | 40697812 ~ 40709293 (-) |
| G2186010 | NA | other | upstream | 259544 | 42963371 ~ 42984016 (-) |
| G2186492 | grik1 | other | upstream | 695348 | 43401613 ~ 43403275 (-) |
| G2186532 | cct8 | other | upstream | 819487 | 43525752 ~ 43526754 (-) |
| G2186529 | cct8 | other | upstream | 826660 | 43532925 ~ 43536669 (-) |
| G2186630 | NA | other | upstream | 973687 | 43679952 ~ 43680591 (-) |
