G2186532 (cct8)


Basic Information

Item Value
gene id G2186532
gene name cct8
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 43525752 ~ 43526754 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2500044
GACGACCATGAGCTGGTACCCTACCTGACGACCATGAGCTGGGACCCTACCTGACGACCATGAGCTGGGACCCTACCTGACGACCATGAGCTGGGACCCTACCTGACGACCATGAGCTGGGACCCTACCTGACGACCATGAGCTGGGACCCTACCTGACGACCATGAGCTGGTACTTGTTGGCGTAGTGCAGCGCCATATCTGCCACTTTGCCACCGGTCACCACTACGTTGGCGCCTGCCTCAGCGATGGACTTGACTTGGGCTTCCatcatatcctcctctcccttACTGAAGTTAAGGAGCTCCTCCGCATTGTTAATCAACACGGTACCCTTGGTTTCTGTGACCATGCAGTCGAAGGGGCAGGAGAAGACTGCGATCTTGGCGTCTTTAATTGACGTGacatctccctccgtctccttCTTGAACACCATCCCATGGAGCACTGAGGACGAAGTCAGTCCGCAGCCCTGCAGACACACCAGAGAGCAGTGTAACAGACCCCCCCAACCAGTAATATCTTGCCGTGTTTTGTAAACGCACATCTAAAATACCATTGTGATTTCGGCTTCTAAACTCCAGTGAGAATTCATCAGACAGCTCTCTCTAGACTGATGTCTAGCTTCCTTTTCTCTGGTAAAAATCCAAGATTCACTTCAAGCAAAACATAATGACCAATGCAATCGTTT

Function

symbol description
cct8 Predicted to enable unfolded protein binding activity. Acts upstream of or within behavioral response to nicotine. Predicted to be located in cytoplasm. Predicted to be part of chaperonin-containing T-complex. Is expressed in brain. Orthologous to human CCT8 (chaperonin containing TCP1 subunit 8).

NR:

description
PREDICTED: T-complex protein 1 subunit theta isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2500044 True 690 TUCP 0.52 2 43525752 43526754

Neighbor

gene id symbol gene type direction distance location
map3k7cl map3k7cl coding downstream 12274 43478190 ~ 43513478 (-)
bach1b bach1 coding downstream 55510 43450328 ~ 43470242 (-)
eva1c LOC106563889 coding downstream 750206 42749925 ~ 42775546 (-)
LOC118945309 NA coding downstream 785308 42734257 ~ 42740444 (-)
LOC110509472 LOC106563882 coding downstream 918677 42162163 ~ 42661980 (-)
cadm2a cadm2 coding upstream 287875 43814629 ~ 44580847 (-)
LOC110509396 LOC106594559 coding upstream 1357683 44884437 ~ 44890751 (-)
LOC110510296 LOC106563931 coding upstream 1567664 45094418 ~ 45115616 (-)
LOC118945272 NA coding upstream 1581466 45108220 ~ 45112955 (-)
paxbp1 paxbp1 coding upstream 1593328 45120082 ~ 45175405 (-)
G2186544 NA non-coding downstream 11843 43513568 ~ 43513909 (-)
G2186543 NA non-coding downstream 13852 43511619 ~ 43511900 (-)
G2186539 NA non-coding downstream 35815 43489636 ~ 43489937 (-)
G2186537 NA non-coding downstream 40374 43485092 ~ 43485378 (-)
G2186521 NA non-coding downstream 63187 43459376 ~ 43462565 (-)
G2186529 cct8 non-coding upstream 7817 43532925 ~ 43536669 (-)
G2186573 NA non-coding upstream 50819 43577573 ~ 43578003 (-)
G2186577 NA non-coding upstream 53870 43580624 ~ 43586848 (-)
G2186592 NA non-coding upstream 93085 43619839 ~ 43620803 (-)
G2186598 NA non-coding upstream 99918 43626672 ~ 43627196 (-)
G2186492 grik1 other downstream 122477 43401613 ~ 43403275 (-)
G2186010 NA other downstream 541736 42963371 ~ 42984016 (-)
G2185525 LOC106563877 other downstream 1672746 41852200 ~ 41853006 (-)
G2185427 NA other downstream 1929823 41595652 ~ 41595929 (-)
LOC110509471 LOC106563870 other downstream 2015351 41502509 ~ 41530610 (-)
G2186630 NA other upstream 153198 43679952 ~ 43680591 (-)
G2186662 NA other upstream 198405 43725159 ~ 43726847 (-)
G2186701 NA other upstream 265114 43790416 ~ 43793647 (-)
G2187085 NA other upstream 402976 43929730 ~ 43930514 (-)

Expression


Co-expression Network