G2186529 (cct8)


Basic Information

Item Value
gene id G2186529
gene name cct8
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 43532925 ~ 43536669 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2500037
TATGAAGTAGGCCCCAGAGACCAGCCCACTATTGGATGGTACAGATGTATACTTTGATCCCAACGATCTGAAATCAAAACACATTTGAGGTTGTAACGTATCAATGAacccagtctgtgtgtgtgtgtgtgtacctggtctaCTCGGAGCACGGTGATAGCAGCGTTGGTAGCTAGTTTGATGccccagtGTTTGACCAGGAAAGGCTCCAGGATCCCAGCTTCAAGCATGTCCTTCAGAGCAGCACCCTCTCcTCGATGTCAAAGCCCATGTTCTTGTTGCCCTCATGATGCACGGCGTACAATTTGGAGATGAGCTCGTTTCCCTTGATGCCAGAGTTCTCTGCCAACGCTCTGGGCACCGCCTCAAACGCCTCAGCAAACTTCTTAATGGCATACTGCTCCAGACCAGGAcacgaCTCTCCGTATGACGTGATCTGTCTAGCCAGTTCTATCTCTGTGGCTCCGGCACCTGGCACCAGTCTCTTGTCTCGGACCAGAACCTTGAAGGTGTTGACCCCGTCGTCGATGGCTCGCTCGATATCATCCATCCGGTTGTCAGTGGATCCTCTAATCACCAGGGTGGAGATGGCACCATCCTCTTtctctggggaggaggaggaagagaggtggaaagagaA
>TU2500038
cAGGAATGAAGTGCCTTTTAATTTGAGAGAAGAACATAAAAAGCAACGCAGTGACATCATCAATCCATCCATGTCATCGCTCCTTCCATCACACAGTAACCACGCAGGACGGTGCCTACACAATACGCCAAACGCTTTGGACTTTAAATAAAACATAGAAAAACCAGGTTGGGGAGGGCAGGGGGGGGGGCATAGTGGCAGGGGGTTAGGTGGTCAAAAGGGTAGAGGTCATGTTCAGTCATCTTCATCCCAGTCTTTCTTGCCTGTGGGGGCTTTGGGTCCGCCTGCCGGTTTGGCCATGATgatctggtctaCTCGGAGCACGGTGATAGCAGCGTTGGTAGCTAGTTTGATACCCCAGTGTTTGACCAGGAAAGGCTCCAGGATCCCAGCTTCAAGCATGTCCTTCAGAGCAGCACCCTCTCcCTCGATGTCAAAGCCCATGTTCTTGTTGCCCTCATGATGCACGGCGTACAATTTGGAGATGAGCTCGTTTCCCTTGATGCCAGAGTTCTCTGCCAACGCTCTGGGCACCGCCTCAAACGCCTCAGCAAACTTCTTAATGGCATACTGCTCCAGACCAGGAcacgaCTCTCCGTATGACGTGATCTGTCTAGCCAGTTCTATCTCTGTGGCTCCGGCACCTGGCACCAGTCTCTTGTCTCGGACCAGAACCTTGAAGGTGTTGACCCCGTCGTCGATGGCTCGCTCGATATCATCCATCCGGTTGTCAGTGGATCCTCTAATCACCAGGGTGGAGATGGCACCATCCTCTTtctctggggaggaggaggaagagaggtggaaagagaA
>TU2500039
cAGGAATGAAGTGCCTTTTAATTTGAGAGAAGAACATAAAAAGCAACGCAGTGACATCATCAATCCATCCATGTCATCGCTCCTTCCATCACACAGTAACCACGCAGGACGGTGCCTACACAATACGCCAAACGCTTTGGACTTTAAATAAAACATAGAAAAACCAGGTTGGGGAGGGCAGGGGGGGGGGCATAGTGGCAGGGGGTTAGGTGGTCAAAAGGGTAGAGGTCATGTTCAGTCATCTTCATCCCAGTCTTTCTTGCCTGTGGGGGCTTTGGGTCCGCCTGCCGGTTTGGCCATGATgatCTGTCAGTGTGTACTCTGTCCTGTTCAGAAAGGTTAGTGGTGTGTGTCAAAATGTTCAGGCTCGTCTCCCTCGTCCTTGTCCCAGTGGCCTTGTTGTTTAGGAGCCCGGGGCCCACCTGCTGGCTTAGCCATGATAATCTacacacaaacaccccccccccaccacaaacacacagattaaCACACATCCTGTACATTTTCTACAGGATCCATGGTGGCTGATGAGAACTCGGGAAAGAGAAGTGAAGACAGCAATTAAAAAGATGAAAACAACATTTTACTCCGATTGACCTGCAATGAGaagatgagtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtagctggtcCAGTAGGAGCACAGTGAATGAAAGTGGTAGGGATGTGTACGCCCCCCCCCCCGTCAAGACAAATTGGATACGTATCTAGCTAGATACATGGGCTTGTATACGATATACAGGAACTAAACTTTTAGTTCGGTTAGAGGAACGAGTCGATGGGATTTGGGTCGATGTACAAACACATCCATCTAAATTCAAAATCTCCCGCAGGCGGAGCTCATGAGTCGACACGAGTAAATATCATCTATGGTTTAAGTAGGAACTGGGTGGTTTCGA

Function

symbol description
cct8 Predicted to enable unfolded protein binding activity. Acts upstream of or within behavioral response to nicotine. Predicted to be located in cytoplasm. Predicted to be part of chaperonin-containing T-complex. Is expressed in brain. Orthologous to human CCT8 (chaperonin containing TCP1 subunit 8).

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2500037 False 640 TUCP 0.52 4 43532925 43534327
TU2500038 False 813 TUCP 0.53 4 43532925 43536669
TU2500039 True 927 lncRNA 0.48 2 43534571 43536669

Neighbor

gene id symbol gene type direction distance location
map3k7cl map3k7cl coding downstream 21093 43478190 ~ 43513478 (-)
bach1b bach1 coding downstream 64329 43450328 ~ 43470242 (-)
eva1c LOC106563889 coding downstream 759025 42749925 ~ 42775546 (-)
LOC118945309 NA coding downstream 794127 42734257 ~ 42740444 (-)
LOC110509472 LOC106563882 coding downstream 927496 42162163 ~ 42661980 (-)
cadm2a cadm2 coding upstream 277960 43814629 ~ 44580847 (-)
LOC110509396 LOC106594559 coding upstream 1347768 44884437 ~ 44890751 (-)
LOC110510296 LOC106563931 coding upstream 1557749 45094418 ~ 45115616 (-)
LOC118945272 NA coding upstream 1571551 45108220 ~ 45112955 (-)
paxbp1 paxbp1 coding upstream 1583413 45120082 ~ 45175405 (-)
G2186544 NA non-coding downstream 20662 43513568 ~ 43513909 (-)
G2186543 NA non-coding downstream 22671 43511619 ~ 43511900 (-)
G2186539 NA non-coding downstream 44634 43489636 ~ 43489937 (-)
G2186537 NA non-coding downstream 49193 43485092 ~ 43485378 (-)
G2186521 NA non-coding downstream 72006 43459376 ~ 43462565 (-)
G2186573 NA non-coding upstream 40904 43577573 ~ 43578003 (-)
G2186577 NA non-coding upstream 43955 43580624 ~ 43586848 (-)
G2186592 NA non-coding upstream 83170 43619839 ~ 43620803 (-)
G2186598 NA non-coding upstream 90003 43626672 ~ 43627196 (-)
G2186632 NA non-coding upstream 149821 43686490 ~ 43686815 (-)
G2186532 cct8 other downstream 7817 43525752 ~ 43526754 (-)
G2186492 grik1 other downstream 131296 43401613 ~ 43403275 (-)
G2186010 NA other downstream 550555 42963371 ~ 42984016 (-)
G2185525 LOC106563877 other downstream 1681565 41852200 ~ 41853006 (-)
G2185427 NA other downstream 1938642 41595652 ~ 41595929 (-)
G2186630 NA other upstream 143283 43679952 ~ 43680591 (-)
G2186662 NA other upstream 188490 43725159 ~ 43726847 (-)
G2186701 NA other upstream 255199 43790416 ~ 43793647 (-)
G2187085 NA other upstream 393061 43929730 ~ 43930514 (-)
G2187290 NA other upstream 824929 44361598 ~ 44363487 (-)

Expression


Co-expression Network