G2186662


Basic Information

Item Value
gene id G2186662
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 43725159 ~ 43726847 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2500208
tgacacaggagacatggaagaccgggtggacgcgacgaagatatcgcggaagaagaagtcgcactgcgacaggattaatgatccgagaaatacggaacggaccaatgaaccgcggggtcaacttgcgagaagcggtcttaaggggaaggttctgagtggagagccaaactctctgaccgcgacaatatctaggactcttagttctacgcttattagcagctctcacagtctgcgccctataacggcaaagtgcagacctgaccctcttccaggtgcgctcgcaacgttggacaaaagcctgagcggaggggacgctggactcggcgaactgagatgagaacagcggaggctggtacccgaggctactctgaaaaggagatagcccggtcgcagacgaaggaagcgagttgtgggcgtattctgcccaggggagctgttctgaccaagacgcagggttgcgaaaagaaagactgcgtaagatgcgaccaatagtctgattggcccgttctgcttgaccgttagactgggggtgaaagccggaagagagactgacggaagccccaatcaaacggcaaaactccctccaaaattgagacgtgaattgcggacctctgtccgaaacgacgtctgacggaaggccatgaattctgaaaacattctcgatgatgatttgtgccgtctctttagcagaaggaagcttagcaaggggaataaaatgagccgccttagagaacctgtcgacaaccgtaagaataacagtcttccccgctgacgaaggcagtccggtgacaaaatctaaggcgatgtgagaccacggtcgagagggaataggaagcggcctgagacggccggcaggaggggagttaccggacttagtctgcgcgcagaccgaacaagcagccacgaaacgacgcgtgtcatgctcccgggtgggccaccaaaaacgctggcgaatggaagcaagcgtaccccgaacgccagggtggccggctaacttggcagagtgagcccactgaagaacggccagacgagtaggaacgggaacgaaaagaaggttcctaggacaagcgcgcagcgacggagtgtgagtgagtgcttgctttacctgcctctcaattccccagacagtcaacccgacaacacgcccctcagggagaatcccctcggggtcagtggaggctactgaagaactgaagagacgagataaagcatcaggcttggtgttcttagagcccggacgataagaaatcacgaactcgaaacgagcgaaaaacagcgcccaacgcgcctgacgcgcattaagtcgtttggcagaacggatgtactcaaggttcctatggtcagtccaaacgacaaaaggaacggtcgccccctccaaccactgtcgccattcgcctagggctaagcggatggcgagcagttcgcggtttcccacatcatagttacgttccgacggcgacaggcgatgagaaaaatacgcgcatgggtggaccttgtcgtcagagagggagcgctgagaaagaatggctcccacgcccacctctgacgcgtcaacctcgacaacgaactgtctagagacgtcaggtgtaacaaggataggagcggatgtaaaacgattcttgaggagatcaaaagctccctgggcggaaacggaccacttaaagcacgtcttgacagaagtaagggctg

Function

NR:

description
Retrotransposable element Tf2 protein type 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2500208 True 1689 TUCP 0.55 1 43725159 43726847

Neighbor

gene id symbol gene type direction distance location
map3k7cl map3k7cl coding downstream 211681 43478190 ~ 43513478 (-)
bach1b bach1 coding downstream 254917 43450328 ~ 43470242 (-)
eva1c LOC106563889 coding downstream 949613 42749925 ~ 42775546 (-)
LOC118945309 NA coding downstream 984715 42734257 ~ 42740444 (-)
LOC110509472 LOC106563882 coding downstream 1118084 42162163 ~ 42661980 (-)
cadm2a cadm2 coding upstream 87782 43814629 ~ 44580847 (-)
LOC110509396 LOC106594559 coding upstream 1157590 44884437 ~ 44890751 (-)
LOC110510296 LOC106563931 coding upstream 1367571 45094418 ~ 45115616 (-)
LOC118945272 NA coding upstream 1381373 45108220 ~ 45112955 (-)
paxbp1 paxbp1 coding upstream 1393235 45120082 ~ 45175405 (-)
G2186658 NA non-coding downstream 2861 43704440 ~ 43722298 (-)
G2186645 NA non-coding downstream 24413 43699737 ~ 43700746 (-)
G2186641 NA non-coding downstream 28026 43696806 ~ 43697133 (-)
G2186640 NA non-coding downstream 28368 43696592 ~ 43696791 (-)
G2186636 NA non-coding downstream 30545 43693860 ~ 43694614 (-)
G2186692 NA non-coding upstream 42811 43769658 ~ 43769994 (-)
G2186694 NA non-coding upstream 45435 43772282 ~ 43772525 (-)
G2186695 NA non-coding upstream 46298 43773145 ~ 43773391 (-)
G2186696 NA non-coding upstream 50250 43777097 ~ 43777303 (-)
G2186699 NA non-coding upstream 53688 43780535 ~ 43780839 (-)
G2186630 NA other downstream 44568 43679952 ~ 43680591 (-)
G2186529 cct8 other downstream 188490 43532925 ~ 43536669 (-)
G2186532 cct8 other downstream 198405 43525752 ~ 43526754 (-)
G2186492 grik1 other downstream 321884 43401613 ~ 43403275 (-)
G2186010 NA other downstream 741143 42963371 ~ 42984016 (-)
G2186701 NA other upstream 65021 43790416 ~ 43793647 (-)
G2187085 NA other upstream 202883 43929730 ~ 43930514 (-)
G2187290 NA other upstream 634751 44361598 ~ 44363487 (-)
G2187307 NA other upstream 663674 44390521 ~ 44390958 (-)

Expression


Co-expression Network