G2187178


Basic Information

Item Value
gene id G2187178
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 44145250 ~ 44166347 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2500870
cttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggaccttacagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgcttaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccgtacagtgaaatgctgaatacaacaggagcagtagaccttacagtgaaatgctgaatacaacaagtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtagacctgacagtgaaatgctgaatacaacaggtgtagtgaaagacttacagtgaaatgctgaatacaacaggtgtagtgaaaggcttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgttgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgactacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtaatgctgaatacaacaggtgtaatgctgaatacaacaggtgtagtagaccttacagtgtaatgctgaatacaacaggtgtaatgctgaatacaacaggtg
>TU2500875
cttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggaccttacagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgctgaatacaacaggtgtagtagacctcacagtaaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgcttaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2500870 False 996 lncRNA 0.40 4 44145250 44166347
TU2500875 True 432 lncRNA 0.39 2 44162652 44166347

Neighbor

gene id symbol gene type direction distance location
map3k7cl map3k7cl coding downstream 631772 43478190 ~ 43513478 (-)
bach1b bach1 coding downstream 675008 43450328 ~ 43470242 (-)
eva1c LOC106563889 coding downstream 1369704 42749925 ~ 42775546 (-)
LOC118945309 NA coding downstream 1404806 42734257 ~ 42740444 (-)
LOC110509472 LOC106563882 coding downstream 1538175 42162163 ~ 42661980 (-)
LOC110509396 LOC106594559 coding upstream 718090 44884437 ~ 44890751 (-)
LOC110510296 LOC106563931 coding upstream 928071 45094418 ~ 45115616 (-)
LOC118945272 NA coding upstream 941873 45108220 ~ 45112955 (-)
paxbp1 paxbp1 coding upstream 953735 45120082 ~ 45175405 (-)
stoml3b stoml3 coding upstream 1264889 45431236 ~ 45461687 (-)
G2187169 NA non-coding downstream 26617 44118000 ~ 44118633 (-)
G2187166 NA non-coding downstream 31281 44112986 ~ 44113969 (-)
G2187141 NA non-coding downstream 77073 44061700 ~ 44068177 (-)
G2187136 NA non-coding downstream 82426 44049021 ~ 44062824 (-)
G2187118 NA non-coding downstream 126240 44011160 ~ 44019010 (-)
G2187195 NA non-coding upstream 10663 44177010 ~ 44196992 (-)
G2187205 NA non-coding upstream 38153 44204500 ~ 44206602 (-)
G2187213 NA non-coding upstream 53243 44219590 ~ 44220046 (-)
G2187214 NA non-coding upstream 53824 44220171 ~ 44220986 (-)
G2187217 NA non-coding upstream 56473 44222820 ~ 44223127 (-)
G2187085 NA other downstream 214736 43929730 ~ 43930514 (-)
G2186701 NA other downstream 351603 43790416 ~ 43793647 (-)
G2186662 NA other downstream 418403 43725159 ~ 43726847 (-)
G2186630 NA other downstream 464659 43679952 ~ 43680591 (-)
G2186529 cct8 other downstream 608581 43532925 ~ 43536669 (-)
G2187290 NA other upstream 195251 44361598 ~ 44363487 (-)
G2187307 NA other upstream 224174 44390521 ~ 44390958 (-)
G2188249 NA other upstream 1142939 45309286 ~ 45403361 (-)

Expression


Co-expression Network