Gene
RNA
| Item | Value |
|---|---|
| gene id | G2186888 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 44283967 ~ 44322925 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2500499 | True | 218 | lncRNA | 0.43 | 2 | 44283967 | 44322925 |
44,280,000
44,284,000
44,288,000
44,292,000
44,296,000
44,300,000
44,304,000
44,308,000
44,312,000
44,316,000
44,320,000
44,320,000
44,324,000
44,328,000
44,332,000
44,336,000
44,340,000
44,344,000
44,348,000
44,352,000
44,356,000
44,360,000
NC_048593.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ltn1 | ltn1 | coding | upstream | 662868 | 43548269 ~ 43621099 (+) |
| cct8 | cct8 | coding | upstream | 747294 | 43517321 ~ 43536673 (+) |
| LOC118945338 | NA | coding | upstream | 754598 | 43527499 ~ 43529369 (+) |
| grik1a | LOC105026052 | coding | upstream | 862261 | 43328743 ~ 43422689 (+) |
| trnal-cag-32 | NA | coding | upstream | 958289 | 43325596 ~ 43325678 (+) |
| gbe1a | gbe1 | coding | downstream | 595451 | 44918376 ~ 45083739 (+) |
| mtus2a | LOC106563907 | coding | downstream | 881632 | 45204557 ~ 45377103 (+) |
| LOC110518300 | NA | coding | downstream | 1065911 | 45383333 ~ 45391063 (+) |
| LOC110517637 | LOC106563928 | coding | downstream | 1086204 | 45409129 ~ 45422914 (+) |
| LOC118945264 | NA | coding | downstream | 1155264 | 45477230 ~ 45480543 (+) |
| G2186851 | NA | non-coding | upstream | 74945 | 44208727 ~ 44209022 (+) |
| G2186840 | NA | non-coding | upstream | 87062 | 44177010 ~ 44196905 (+) |
| G2186829 | NA | non-coding | upstream | 117596 | 44145292 ~ 44166371 (+) |
| G2186836 | NA | non-coding | upstream | 118424 | 44163231 ~ 44165543 (+) |
| G2186801 | NA | non-coding | upstream | 216404 | 44061344 ~ 44067563 (+) |
| G2186924 | NA | non-coding | downstream | 11253 | 44334178 ~ 44335704 (+) |
| G2186925 | NA | non-coding | downstream | 14106 | 44337031 ~ 44337832 (+) |
| G2186928 | NA | non-coding | downstream | 19617 | 44342542 ~ 44343399 (+) |
| G2186957 | NA | non-coding | downstream | 74895 | 44397820 ~ 44402460 (+) |
| G2186968 | NA | non-coding | downstream | 98595 | 44421520 ~ 44423859 (+) |
| G2186289 | NA | other | upstream | 723057 | 43560617 ~ 43560910 (+) |
| G2186178 | NA | other | upstream | 995271 | 43288075 ~ 43288696 (+) |
| G2186095 | NA | other | upstream | 1133340 | 43089043 ~ 43150627 (+) |
| scaf4a | scaf4 | other | upstream | 1356660 | 42902361 ~ 42955706 (+) |
| hunk | LOC106601811 | other | upstream | 1467195 | 42807994 ~ 42833923 (+) |
| G2186982 | NA | other | downstream | 133683 | 44456608 ~ 44457229 (+) |
| G2187008 | NA | other | downstream | 188071 | 44510996 ~ 44511320 (+) |
| G2187834 | NA | other | downstream | 1028834 | 45351759 ~ 45353269 (+) |
| G2187837 | NA | other | downstream | 1033886 | 45356811 ~ 45357785 (+) |
