Gene
RNA
| Item | Value |
|---|---|
| gene id | G2186928 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 44342542 ~ 44343399 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: pupal cuticle protein-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2500543 | True | 225 | lncRNA | 0.33 | 2 | 44342542 | 44343399 |
44,340,800
44,341,200
44,341,600
44,342,000
44,342,400
44,342,800
44,343,200
44,343,600
44,343,600
44,344,000
44,344,400
44,344,800
44,345,200
44,345,600
44,346,000
44,346,400
NC_048593.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ltn1 | ltn1 | coding | upstream | 721443 | 43548269 ~ 43621099 (+) |
| cct8 | cct8 | coding | upstream | 805869 | 43517321 ~ 43536673 (+) |
| LOC118945338 | NA | coding | upstream | 813173 | 43527499 ~ 43529369 (+) |
| grik1a | LOC105026052 | coding | upstream | 920836 | 43328743 ~ 43422689 (+) |
| trnal-cag-32 | NA | coding | upstream | 1016864 | 43325596 ~ 43325678 (+) |
| gbe1a | gbe1 | coding | downstream | 574977 | 44918376 ~ 45083739 (+) |
| mtus2a | LOC106563907 | coding | downstream | 861158 | 45204557 ~ 45377103 (+) |
| LOC110518300 | NA | coding | downstream | 1045437 | 45383333 ~ 45391063 (+) |
| LOC110517637 | LOC106563928 | coding | downstream | 1065730 | 45409129 ~ 45422914 (+) |
| LOC118945264 | NA | coding | downstream | 1134790 | 45477230 ~ 45480543 (+) |
| G2186925 | NA | non-coding | upstream | 4710 | 44337031 ~ 44337832 (+) |
| G2186924 | NA | non-coding | upstream | 6838 | 44334178 ~ 44335704 (+) |
| G2186888 | NA | non-coding | upstream | 19617 | 44283967 ~ 44322925 (+) |
| G2186851 | NA | non-coding | upstream | 133520 | 44208727 ~ 44209022 (+) |
| G2186840 | NA | non-coding | upstream | 145637 | 44177010 ~ 44196905 (+) |
| G2186957 | NA | non-coding | downstream | 54421 | 44397820 ~ 44402460 (+) |
| G2186968 | NA | non-coding | downstream | 78121 | 44421520 ~ 44423859 (+) |
| G2187004 | NA | non-coding | downstream | 160870 | 44504269 ~ 44505189 (+) |
| G2187039 | NA | non-coding | downstream | 228981 | 44572380 ~ 44574765 (+) |
| G2187043 | NA | non-coding | downstream | 234268 | 44577667 ~ 44577976 (+) |
| G2186289 | NA | other | upstream | 781632 | 43560617 ~ 43560910 (+) |
| G2186178 | NA | other | upstream | 1053846 | 43288075 ~ 43288696 (+) |
| G2186095 | NA | other | upstream | 1191915 | 43089043 ~ 43150627 (+) |
| scaf4a | scaf4 | other | upstream | 1415235 | 42902361 ~ 42955706 (+) |
| hunk | LOC106601811 | other | upstream | 1525770 | 42807994 ~ 42833923 (+) |
| G2186982 | NA | other | downstream | 113209 | 44456608 ~ 44457229 (+) |
| G2187008 | NA | other | downstream | 167597 | 44510996 ~ 44511320 (+) |
| G2187834 | NA | other | downstream | 1008360 | 45351759 ~ 45353269 (+) |
| G2187837 | NA | other | downstream | 1013412 | 45356811 ~ 45357785 (+) |
