G2187301



Basic Information


Item Value
gene id G2187301
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 44383244 ~ 44383625 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2501034
agggatgtttttcagtggcagggactgggagactagtcaggatcgagggaaagatgaatggagcaaagtacagagagatccttgatgaaaacctgctccagagcgttcaggatttcagactggggcgatggttcaccttccaacagcacaacgaccctaaacacacagccaagacaacgcaggagtgtcttcgggacaagtctctgaatgtccttgagtggcccagccagagcccggacatgaactcgataatctctggagagacctgaaaatagctgtgcagagacgctccccatccaacctgacagagctt

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2501034 True 313 lncRNA 0.52 2 44383244 44383625

Neighbor


gene id symbol gene type direction distance location
map3k7cl map3k7cl coding downstream 869766 43478190 ~ 43513478 (-)
bach1b bach1 coding downstream 913002 43450328 ~ 43470242 (-)
eva1c LOC106563889 coding downstream 1607698 42749925 ~ 42775546 (-)
LOC118945309 NA coding downstream 1642800 42734257 ~ 42740444 (-)
LOC110509472 LOC106563882 coding downstream 1776169 42162163 ~ 42661980 (-)
LOC110509396 LOC106594559 coding upstream 500812 44884437 ~ 44890751 (-)
LOC110510296 LOC106563931 coding upstream 710793 45094418 ~ 45115616 (-)
LOC118945272 NA coding upstream 724595 45108220 ~ 45112955 (-)
paxbp1 paxbp1 coding upstream 736457 45120082 ~ 45175405 (-)
stoml3b stoml3 coding upstream 1047611 45431236 ~ 45461687 (-)
G2187297 NA non-coding downstream 2865 44378498 ~ 44380379 (-)
G2187296 NA non-coding downstream 3425 44378235 ~ 44379819 (-)
G2187290 NA non-coding downstream 20968 44361598 ~ 44363487 (-)
G2187289 NA non-coding downstream 26956 44355872 ~ 44356288 (-)
G2187280 NA non-coding downstream 47953 44334226 ~ 44335291 (-)
G2187320 NA non-coding upstream 37874 44421499 ~ 44425192 (-)
G2187324 NA non-coding upstream 48800 44432425 ~ 44432951 (-)
G2187335 NA non-coding upstream 72932 44456557 ~ 44457314 (-)
G2187370 NA non-coding upstream 175928 44559553 ~ 44559993 (-)
G2187381 NA non-coding upstream 188756 44572381 ~ 44577401 (-)
G2187085 NA other downstream 452730 43929730 ~ 43930514 (-)
G2186701 NA other downstream 589597 43790416 ~ 43793647 (-)
G2186662 NA other downstream 656397 43725159 ~ 43726847 (-)
G2186630 NA other downstream 702653 43679952 ~ 43680591 (-)
G2187307 NA other upstream 6896 44390521 ~ 44390958 (-)
G2188249 NA other upstream 925661 45309286 ~ 45403361 (-)
G2188280 NA other upstream 1006517 45390142 ~ 45391144 (-)

Expression



Co-expression Network