Gene
RNA
| Item | Value |
|---|---|
| gene id | G2186957 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 44397820 ~ 44402460 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| gamma-aminobutyric acid receptor subunit alpha-2-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2500577 | True | 443 | lncRNA | 0.41 | 2 | 44397820 | 44402460 |
44,394,000
44,395,000
44,396,000
44,397,000
44,398,000
44,399,000
44,400,000
44,401,000
44,402,000
44,403,000
44,404,000
44,405,000
44,406,000
44,407,000
NC_048593.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ltn1 | ltn1 | coding | upstream | 776721 | 43548269 ~ 43621099 (+) |
| cct8 | cct8 | coding | upstream | 861147 | 43517321 ~ 43536673 (+) |
| LOC118945338 | NA | coding | upstream | 868451 | 43527499 ~ 43529369 (+) |
| grik1a | LOC105026052 | coding | upstream | 976114 | 43328743 ~ 43422689 (+) |
| trnal-cag-32 | NA | coding | upstream | 1072142 | 43325596 ~ 43325678 (+) |
| gbe1a | gbe1 | coding | downstream | 515916 | 44918376 ~ 45083739 (+) |
| mtus2a | LOC106563907 | coding | downstream | 802097 | 45204557 ~ 45377103 (+) |
| LOC110518300 | NA | coding | downstream | 986376 | 45383333 ~ 45391063 (+) |
| LOC110517637 | LOC106563928 | coding | downstream | 1006669 | 45409129 ~ 45422914 (+) |
| LOC118945264 | NA | coding | downstream | 1075729 | 45477230 ~ 45480543 (+) |
| G2186928 | NA | non-coding | upstream | 54421 | 44342542 ~ 44343399 (+) |
| G2186925 | NA | non-coding | upstream | 59988 | 44337031 ~ 44337832 (+) |
| G2186924 | NA | non-coding | upstream | 62116 | 44334178 ~ 44335704 (+) |
| G2186888 | NA | non-coding | upstream | 74895 | 44283967 ~ 44322925 (+) |
| G2186851 | NA | non-coding | upstream | 188798 | 44208727 ~ 44209022 (+) |
| G2186968 | NA | non-coding | downstream | 19060 | 44421520 ~ 44423859 (+) |
| G2187004 | NA | non-coding | downstream | 101809 | 44504269 ~ 44505189 (+) |
| G2187039 | NA | non-coding | downstream | 169920 | 44572380 ~ 44574765 (+) |
| G2187043 | NA | non-coding | downstream | 175207 | 44577667 ~ 44577976 (+) |
| G2187400 | NA | non-coding | downstream | 207379 | 44609839 ~ 44610233 (+) |
| G2186289 | NA | other | upstream | 836910 | 43560617 ~ 43560910 (+) |
| G2186178 | NA | other | upstream | 1109124 | 43288075 ~ 43288696 (+) |
| G2186095 | NA | other | upstream | 1247193 | 43089043 ~ 43150627 (+) |
| scaf4a | scaf4 | other | upstream | 1470513 | 42902361 ~ 42955706 (+) |
| hunk | LOC106601811 | other | upstream | 1581048 | 42807994 ~ 42833923 (+) |
| G2186982 | NA | other | downstream | 54148 | 44456608 ~ 44457229 (+) |
| G2187008 | NA | other | downstream | 108536 | 44510996 ~ 44511320 (+) |
| G2187834 | NA | other | downstream | 949299 | 45351759 ~ 45353269 (+) |
| G2187837 | NA | other | downstream | 954351 | 45356811 ~ 45357785 (+) |
