G2187403



Basic Information


Item Value
gene id G2187403
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 44611497 ~ 44612018 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2501160
aaagtattcggccctcttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatatgaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttgtaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaataatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactttgGTAGTCTCAGaagtctgttaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtctgagatactgttgtgaagaagtttaaagccggatttggatacaaaaatatttcccaagctttaaacatcccaaggagcactgtgcaagcaataatattgaaatggaaggagta

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2501160 True 522 lncRNA 0.38 1 44611497 44612018

Neighbor


gene id symbol gene type direction distance location
cadm2a cadm2 coding downstream 30650 43814629 ~ 44580847 (-)
map3k7cl map3k7cl coding downstream 1098019 43478190 ~ 43513478 (-)
bach1b bach1 coding downstream 1141255 43450328 ~ 43470242 (-)
eva1c LOC106563889 coding downstream 1835951 42749925 ~ 42775546 (-)
LOC118945309 NA coding downstream 1871053 42734257 ~ 42740444 (-)
LOC110509396 LOC106594559 coding upstream 272419 44884437 ~ 44890751 (-)
LOC110510296 LOC106563931 coding upstream 482400 45094418 ~ 45115616 (-)
LOC118945272 NA coding upstream 496202 45108220 ~ 45112955 (-)
paxbp1 paxbp1 coding upstream 508064 45120082 ~ 45175405 (-)
stoml3b stoml3 coding upstream 819218 45431236 ~ 45461687 (-)
G2187401 NA non-coding downstream 522 44610740 ~ 44610975 (-)
G2187381 NA non-coding downstream 34096 44572381 ~ 44577401 (-)
G2187370 NA non-coding downstream 51504 44559553 ~ 44559993 (-)
G2187335 NA non-coding downstream 154183 44456557 ~ 44457314 (-)
G2187324 NA non-coding downstream 178546 44432425 ~ 44432951 (-)
G2187423 NA non-coding upstream 16964 44628982 ~ 44629397 (-)
G2187425 NA non-coding upstream 18162 44630180 ~ 44630381 (-)
G2187439 NA non-coding upstream 32123 44644141 ~ 44644602 (-)
G2187450 NA non-coding upstream 40197 44652215 ~ 44652484 (-)
G2187463 NA non-coding upstream 56177 44668195 ~ 44668495 (-)
G2187307 NA other downstream 220539 44390521 ~ 44390958 (-)
G2187290 NA other downstream 248010 44361598 ~ 44363487 (-)
G2187085 NA other downstream 680983 43929730 ~ 43930514 (-)
G2186701 NA other downstream 817850 43790416 ~ 43793647 (-)
G2186662 NA other downstream 884650 43725159 ~ 43726847 (-)
G2188249 NA other upstream 697268 45309286 ~ 45403361 (-)
G2188280 NA other upstream 778124 45390142 ~ 45391144 (-)
G2188287 NA other upstream 785458 45397476 ~ 45399546 (-)

Expression



Co-expression Network