Gene
RNA
| Item | Value |
|---|---|
| gene id | G2188178 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 45151793 ~ 45152279 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2502163 | True | 250 | lncRNA | 0.55 | 2 | 45151793 | 45152279 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110510296 | LOC106563931 | coding | downstream | 36177 | 45094418 ~ 45115616 (-) |
| LOC118945272 | NA | coding | downstream | 38838 | 45108220 ~ 45112955 (-) |
| LOC110509396 | LOC106594559 | coding | downstream | 261042 | 44884437 ~ 44890751 (-) |
| cadm2a | cadm2 | coding | downstream | 570946 | 43814629 ~ 44580847 (-) |
| map3k7cl | map3k7cl | coding | downstream | 1638315 | 43478190 ~ 43513478 (-) |
| stoml3b | stoml3 | coding | upstream | 278957 | 45431236 ~ 45461687 (-) |
| LOC118945278 | NA | coding | upstream | 312471 | 45464750 ~ 45466196 (-) |
| proser1 | proser1 | coding | upstream | 315032 | 45467311 ~ 45495435 (-) |
| smpd1 | smpd1 | coding | upstream | 515978 | 45668257 ~ 45689589 (-) |
| LOC118945350 | NA | coding | upstream | 591337 | 45743616 ~ 45760571 (-) |
| G2188174 | NA | non-coding | downstream | 9553 | 45141733 ~ 45142240 (-) |
| G2188139 | NA | non-coding | downstream | 18488 | 45132531 ~ 45133305 (-) |
| G2188142 | NA | non-coding | downstream | 43659 | 45106512 ~ 45108134 (-) |
| G2188157 | NA | non-coding | downstream | 84586 | 45065405 ~ 45067207 (-) |
| G2188134 | NA | non-coding | upstream | 192 | 45152471 ~ 45153592 (-) |
| G2188187 | NA | non-coding | upstream | 27828 | 45180107 ~ 45180582 (-) |
| G2188200 | NA | non-coding | upstream | 88522 | 45240801 ~ 45241966 (-) |
| G2188202 | NA | non-coding | upstream | 90388 | 45242667 ~ 45243206 (-) |
| G2188204 | LOC106563907 | non-coding | upstream | 92546 | 45244825 ~ 45247768 (-) |
| paxbp1 | paxbp1 | other | downstream | 20427 | 45120082 ~ 45175405 (-) |
| G2187307 | NA | other | downstream | 760835 | 44390521 ~ 44390958 (-) |
| G2187290 | NA | other | downstream | 788306 | 44361598 ~ 44363487 (-) |
| G2187085 | NA | other | downstream | 1221279 | 43929730 ~ 43930514 (-) |
| G2188249 | NA | other | upstream | 157007 | 45309286 ~ 45403361 (-) |
| G2188280 | NA | other | upstream | 237863 | 45390142 ~ 45391144 (-) |
| G2188287 | NA | other | upstream | 245197 | 45397476 ~ 45399546 (-) |
| G2188420 | NA | other | upstream | 650676 | 45802955 ~ 45804187 (-) |
