Gene
RNA
| Item | Value |
|---|---|
| gene id | G2188249 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 45309286 ~ 45403361 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2502242 | False | 472 | TUCP | 0.42 | 3 | 45309286 | 45403361 |
| TU2502241 | True | 218 | lncRNA | 0.34 | 3 | 45368400 | 45403361 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| paxbp1 | paxbp1 | coding | downstream | 192995 | 45120082 ~ 45175405 (-) |
| LOC110510296 | LOC106563931 | coding | downstream | 252784 | 45094418 ~ 45115616 (-) |
| LOC118945272 | NA | coding | downstream | 255445 | 45108220 ~ 45112955 (-) |
| LOC110509396 | LOC106594559 | coding | downstream | 477649 | 44884437 ~ 44890751 (-) |
| cadm2a | cadm2 | coding | downstream | 787553 | 43814629 ~ 44580847 (-) |
| stoml3b | stoml3 | coding | upstream | 27875 | 45431236 ~ 45461687 (-) |
| LOC118945278 | NA | coding | upstream | 61389 | 45464750 ~ 45466196 (-) |
| proser1 | proser1 | coding | upstream | 63950 | 45467311 ~ 45495435 (-) |
| smpd1 | smpd1 | coding | upstream | 264896 | 45668257 ~ 45689589 (-) |
| LOC118945350 | NA | coding | upstream | 340255 | 45743616 ~ 45760571 (-) |
| G2188273 | NA | non-coding | downstream | 15138 | 45351101 ~ 45353262 (-) |
| G2188250 | NA | non-coding | downstream | 54831 | 45310966 ~ 45313569 (-) |
| G2188248 | NA | non-coding | downstream | 57496 | 45308589 ~ 45310904 (-) |
| G2188204 | LOC106563907 | non-coding | downstream | 120632 | 45244825 ~ 45247768 (-) |
| G2188202 | NA | non-coding | downstream | 125194 | 45242667 ~ 45243206 (-) |
| G2188294 | NA | non-coding | upstream | 8437 | 45411798 ~ 45412112 (-) |
| G2188301 | NA | non-coding | upstream | 29522 | 45432883 ~ 45433191 (-) |
| G2188303 | NA | non-coding | upstream | 33420 | 45436781 ~ 45438646 (-) |
| G2188338 | NA | non-coding | upstream | 120388 | 45523749 ~ 45524676 (-) |
| G2188321 | NA | non-coding | upstream | 133085 | 45536446 ~ 45537510 (-) |
| G2187307 | NA | other | downstream | 977442 | 44390521 ~ 44390958 (-) |
| G2187290 | NA | other | downstream | 1004913 | 44361598 ~ 44363487 (-) |
| G2187085 | NA | other | downstream | 1437886 | 43929730 ~ 43930514 (-) |
| G2188420 | NA | other | upstream | 399594 | 45802955 ~ 45804187 (-) |
| G2188877 | NA | other | upstream | 678025 | 46081386 ~ 46084784 (-) |
| G2188868 | chordc1 | other | upstream | 739958 | 46143319 ~ 46157806 (-) |
| G2189115 | NA | other | upstream | 1230877 | 46634238 ~ 46636168 (-) |
| G2188200 | NA | non-coding | downstream | 67320 | 45240801 ~ 45241966 (-) |
| G2188187 | NA | non-coding | downstream | 128704 | 45180107 ~ 45180582 (-) |
| G2188134 | NA | non-coding | downstream | 155694 | 45152471 ~ 45153592 (-) |
