Gene
RNA
| Item | Value |
|---|---|
| gene id | G2187850 |
| gene name | stoml3 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 45437718 ~ 45456592 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| stoml3 | Predicted to act upstream of or within signal transduction. Predicted to be located in cilium and membrane raft. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. |
| description |
|---|
| erythrocyte band 7 integral membrane protein-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2501701 | True | 1380 | lncRNA | 0.43 | 4 | 45437718 | 45456592 |
45,436,000
45,440,000
45,444,000
45,448,000
45,452,000
45,456,000
45,460,000
45,464,000
45,468,000
45,472,000
45,476,000
NC_048593.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110517637 | LOC106563928 | coding | upstream | 14804 | 45409129 ~ 45422914 (+) |
| LOC110518300 | NA | coding | upstream | 47240 | 45383333 ~ 45391063 (+) |
| mtus2a | LOC106563907 | coding | upstream | 60615 | 45204557 ~ 45377103 (+) |
| gbe1a | gbe1 | coding | upstream | 353979 | 44918376 ~ 45083739 (+) |
| ltn1 | ltn1 | coding | upstream | 1816619 | 43548269 ~ 43621099 (+) |
| LOC118945264 | NA | coding | downstream | 21597 | 45477230 ~ 45480543 (+) |
| vps36 | vps36 | coding | downstream | 39016 | 45495608 ~ 45537579 (+) |
| LOC110509476 | thsd1 | coding | downstream | 88337 | 45544929 ~ 45620110 (+) |
| tpte | LOC106563924 | coding | downstream | 176846 | 45633438 ~ 45661226 (+) |
| chordc1b | chordc1 | coding | downstream | 679492 | 46136084 ~ 46156675 (+) |
| G2187844 | NA | non-coding | upstream | 33150 | 45404310 ~ 45404568 (+) |
| G2187817 | NA | non-coding | upstream | 34356 | 45308799 ~ 45403362 (+) |
| G2187734 | NA | non-coding | upstream | 54539 | 45379764 ~ 45383179 (+) |
| G2187836 | NA | non-coding | upstream | 80980 | 45356057 ~ 45356738 (+) |
| G2187890 | NA | non-coding | downstream | 6241 | 45462833 ~ 45544207 (+) |
| G2187888 | NA | non-coding | downstream | 8160 | 45464752 ~ 45465329 (+) |
| G2187881 | NA | non-coding | downstream | 19739 | 45476331 ~ 45476862 (+) |
| G2187934 | NA | non-coding | downstream | 106700 | 45563292 ~ 45566596 (+) |
| G2187841 | LOC106563930 | other | upstream | 28998 | 45394006 ~ 45408720 (+) |
| G2187837 | NA | other | upstream | 79933 | 45356811 ~ 45357785 (+) |
| G2187834 | NA | other | upstream | 84449 | 45351759 ~ 45353269 (+) |
| G2187008 | NA | other | upstream | 926398 | 44510996 ~ 44511320 (+) |
| G2187946 | NA | other | downstream | 142225 | 45598817 ~ 45603196 (+) |
| G2188678 | NA | other | downstream | 863936 | 46320225 ~ 46325583 (+) |
| LOC110517633 | LOC106604056 | other | downstream | 990382 | 46446951 ~ 46489028 (+) |
| LOC118945337 | LOC108237022 | other | downstream | 1047683 | 46504069 ~ 46563999 (+) |
