Gene
RNA
| Item | Value |
|---|---|
| gene id | G2188370 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 45598750 ~ 45600860 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: nef-associated protein 1 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2502380 | True | 500 | lncRNA | 0.44 | 4 | 45598750 | 45600860 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| proser1 | proser1 | coding | downstream | 103315 | 45467311 ~ 45495435 (-) |
| LOC118945278 | NA | coding | downstream | 132554 | 45464750 ~ 45466196 (-) |
| stoml3b | stoml3 | coding | downstream | 137063 | 45431236 ~ 45461687 (-) |
| paxbp1 | paxbp1 | coding | downstream | 423345 | 45120082 ~ 45175405 (-) |
| LOC118945272 | NA | coding | downstream | 485795 | 45108220 ~ 45112955 (-) |
| smpd1 | smpd1 | coding | upstream | 67397 | 45668257 ~ 45689589 (-) |
| LOC118945350 | NA | coding | upstream | 142756 | 45743616 ~ 45760571 (-) |
| si:ch1073-15f19.2 | NA | coding | upstream | 167872 | 45768732 ~ 45780271 (-) |
| LOC110510923 | LOC103354503 | coding | upstream | 204008 | 45804868 ~ 46118068 (-) |
| grm5a | LOC100700102 | coding | upstream | 617703 | 46218563 ~ 46294863 (-) |
| G2188368 | NA | non-coding | downstream | 7669 | 45585096 ~ 45591081 (-) |
| G2188367 | NA | non-coding | downstream | 8160 | 45584058 ~ 45590590 (-) |
| G2188359 | NA | non-coding | downstream | 33899 | 45563108 ~ 45564851 (-) |
| G2188321 | NA | non-coding | downstream | 61240 | 45536446 ~ 45537510 (-) |
| G2188338 | NA | non-coding | downstream | 74074 | 45523749 ~ 45524676 (-) |
| G2188381 | NA | non-coding | upstream | 20131 | 45620991 ~ 45622228 (-) |
| G2188388 | LOC106563924 | non-coding | upstream | 32659 | 45633519 ~ 45643487 (-) |
| G2188379 | NA | non-coding | upstream | 45929 | 45646789 ~ 45661224 (-) |
| G2188403 | NA | non-coding | upstream | 72070 | 45672930 ~ 45673774 (-) |
| G2188406 | NA | non-coding | upstream | 85408 | 45686268 ~ 45686520 (-) |
| G2188249 | NA | other | downstream | 195389 | 45309286 ~ 45403361 (-) |
| G2188287 | NA | other | downstream | 199204 | 45397476 ~ 45399546 (-) |
| G2188280 | NA | other | downstream | 207606 | 45390142 ~ 45391144 (-) |
| LOC110509396 | LOC106594559 | other | downstream | 708325 | 44884437 ~ 44890751 (-) |
| G2188420 | NA | other | upstream | 202095 | 45802955 ~ 45804187 (-) |
| G2188877 | NA | other | upstream | 480526 | 46081386 ~ 46084784 (-) |
| G2188868 | chordc1 | other | upstream | 542459 | 46143319 ~ 46157806 (-) |
| G2189115 | NA | other | upstream | 1033378 | 46634238 ~ 46636168 (-) |
