Gene
RNA
| Item | Value |
|---|---|
| gene id | G2187949 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 45618039 ~ 45618346 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2501827 | True | 208 | lncRNA | 0.37 | 3 | 45618039 | 45618346 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| vps36 | vps36 | coding | upstream | 80460 | 45495608 ~ 45537579 (+) |
| LOC118945264 | NA | coding | upstream | 138021 | 45477230 ~ 45480543 (+) |
| LOC110517637 | LOC106563928 | coding | upstream | 195125 | 45409129 ~ 45422914 (+) |
| LOC110518300 | NA | coding | upstream | 227561 | 45383333 ~ 45391063 (+) |
| mtus2a | LOC106563907 | coding | upstream | 240936 | 45204557 ~ 45377103 (+) |
| tpte | LOC106563924 | coding | downstream | 15092 | 45633438 ~ 45661226 (+) |
| chordc1b | chordc1 | coding | downstream | 517738 | 46136084 ~ 46156675 (+) |
| LOC118945298 | NA | coding | downstream | 668238 | 46286584 ~ 46292572 (+) |
| LOC110517634 | LOC106563910 | coding | downstream | 759380 | 46377726 ~ 46439876 (+) |
| LOC110517633 | LOC106604056 | coding | downstream | 828605 | 46446951 ~ 46489028 (+) |
| G2187946 | NA | non-coding | upstream | 18774 | 45598817 ~ 45603196 (+) |
| G2187944 | NA | non-coding | upstream | 26967 | 45585091 ~ 45591072 (+) |
| G2187943 | NA | non-coding | upstream | 27493 | 45584040 ~ 45590546 (+) |
| G2187934 | NA | non-coding | upstream | 51443 | 45563292 ~ 45566596 (+) |
| G2187913 | NA | non-coding | downstream | 4455 | 45622801 ~ 45623290 (+) |
| G2187956 | NA | non-coding | downstream | 27966 | 45646312 ~ 45646632 (+) |
| G2187923 | NA | non-coding | downstream | 31352 | 45649698 ~ 45650156 (+) |
| G2187961 | smpd1 | non-coding | downstream | 49928 | 45668274 ~ 45669647 (+) |
| G2187976 | NA | non-coding | downstream | 84494 | 45702840 ~ 45705376 (+) |
| LOC110509476 | thsd1 | other | upstream | 12602 | 45544929 ~ 45620110 (+) |
| G2187841 | LOC106563930 | other | upstream | 209319 | 45394006 ~ 45408720 (+) |
| G2187837 | NA | other | upstream | 260254 | 45356811 ~ 45357785 (+) |
| G2187834 | NA | other | upstream | 264770 | 45351759 ~ 45353269 (+) |
| G2188678 | NA | other | downstream | 702182 | 46320225 ~ 46325583 (+) |
| LOC118945337 | LOC108237022 | other | downstream | 885929 | 46504069 ~ 46563999 (+) |
| G2188775 | NA | other | downstream | 939102 | 46557448 ~ 46558556 (+) |
| G2188866 | NA | other | downstream | 1138904 | 46757250 ~ 46758020 (+) |
