G2188420


Basic Information

Item Value
gene id G2188420
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 45802955 ~ 45804187 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2502464
agagacggagagcaagagagacagacacacagggacggagagagagacagacagacagacagagacagagagcgagagagacacacagagagagagagagacagacagacagcgagagacagacaaacacacagagacggagagagagagacagacagagactgagacgaagagagacagaaagacacacagagacgcagagacagacagacagacagacagacagacagacagacagacagacagacacacagagacagagagagagagacagacagctacagAGACGAAGATATAGGCAGACACAGAGACGAAGAgataaacagacaaacagagatgaagagagagacagacagacagagagagagacagacagacacacagagacggagagagagacagacacacagagacggagagagacagacacacagacgagagacagacagacacacagagacggagagagagacagacacacagagagagagacagacagacagacacaggctaTTGAATAGCTGCAGTCACAGCCTGTATCTTCACAGTCTCAACAATATGAAGTGTGGATTCTCTGTTCATTTGCAGTTGTATGTTATATATTTTACTACAGACAttctacatgtactgtatgtttgtctTCTGTCTGTCAATATGAGTTTGattgtaaatatacagtatatttgctATTTTTCTGCAACTGAATAATACTTAGGAATTGTTAGGTAACACTTTACAATACAGACAGATTCATTAACATGAGGCAATATAGTAGTTGACTTGAAAACAGCATTACTCAGTGTATTTATGTATAAACTTAACTTAGCTAATTAGTTATTGGTTAGCTATTAGTTAGCTCTTGCTGTTATTCGTGTTGATTAATGTCTCTTTGTTGTAACGACTTACCAACTATTTAATAGTCTGTTGAGTAACTATCGATGATTAAATAGATGTGacacat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2502464 True 961 TUCP 0.42 3 45802955 45804187
Loading

Neighbor

gene id symbol gene type direction distance location
si:ch1073-15f19.2 NA coding downstream 22684 45768732 ~ 45780271 (-)
LOC118945350 NA coding downstream 42384 45743616 ~ 45760571 (-)
smpd1 smpd1 coding downstream 113366 45668257 ~ 45689589 (-)
proser1 proser1 coding downstream 307520 45467311 ~ 45495435 (-)
LOC118945278 NA coding downstream 336759 45464750 ~ 45466196 (-)
LOC110510923 LOC103354503 coding upstream 681 45804868 ~ 46118068 (-)
grm5a LOC100700102 coding upstream 414376 46218563 ~ 46294863 (-)
tmem135 tmem135 coding upstream 521014 46325201 ~ 46353650 (-)
LOC118945303 NA coding upstream 613806 46417993 ~ 46418609 (-)
LOC118945322 NA coding upstream 763244 46567431 ~ 46568798 (-)
G2188427 NA non-coding downstream 68047 45717400 ~ 45734908 (-)
G2188412 NA non-coding downstream 98049 45702938 ~ 45704906 (-)
G2188409 NA non-coding downstream 102496 45695767 ~ 45700459 (-)
G2188406 NA non-coding downstream 116435 45686268 ~ 45686520 (-)
G2188403 NA non-coding downstream 129181 45672930 ~ 45673774 (-)
G2188456 NA non-coding upstream 6846 45811033 ~ 45811343 (-)
G2188457 NA non-coding upstream 7252 45811439 ~ 45811993 (-)
G2188476 NA non-coding upstream 72218 45876405 ~ 45877432 (-)
G2188492 NA non-coding upstream 128103 45932290 ~ 45932792 (-)
G2188249 NA other downstream 399594 45309286 ~ 45403361 (-)
G2188287 NA other downstream 403409 45397476 ~ 45399546 (-)
G2188280 NA other downstream 411811 45390142 ~ 45391144 (-)
paxbp1 paxbp1 other downstream 671589 45120082 ~ 45175405 (-)
G2188877 NA other upstream 277199 46081386 ~ 46084784 (-)
G2188868 chordc1 other upstream 339132 46143319 ~ 46157806 (-)
G2189115 NA other upstream 830051 46634238 ~ 46636168 (-)
G2189204 NA other upstream 965496 46769683 ~ 46769961 (-)
G2189814 NA other upstream 1438862 47243049 ~ 47270482 (-)

Expression

G2188420 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 4.
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G2188420 Expression in each Bioproject

Bar chart with 18 bars.
G2188420 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
End of interactive chart.

Co-expression Network