Gene
RNA
| Item | Value |
|---|---|
| gene id | G2188888 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 46115995 ~ 46116335 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC100142646 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2503108 | True | 341 | lncRNA | 0.50 | 1 | 46115995 | 46116335 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:ch1073-15f19.2 | NA | coding | downstream | 335724 | 45768732 ~ 45780271 (-) |
| LOC118945350 | NA | coding | downstream | 355424 | 45743616 ~ 45760571 (-) |
| smpd1 | smpd1 | coding | downstream | 426406 | 45668257 ~ 45689589 (-) |
| proser1 | proser1 | coding | downstream | 620560 | 45467311 ~ 45495435 (-) |
| LOC118945278 | NA | coding | downstream | 649799 | 45464750 ~ 45466196 (-) |
| grm5a | LOC100700102 | coding | upstream | 102228 | 46218563 ~ 46294863 (-) |
| tmem135 | tmem135 | coding | upstream | 208866 | 46325201 ~ 46353650 (-) |
| LOC118945303 | NA | coding | upstream | 301658 | 46417993 ~ 46418609 (-) |
| LOC118945322 | NA | coding | upstream | 451096 | 46567431 ~ 46568798 (-) |
| si:dkey-175g6.2 | NA | coding | upstream | 557576 | 46673911 ~ 46683741 (-) |
| G2188886 | NA | non-coding | downstream | 2319 | 46113315 ~ 46113676 (-) |
| G2188884 | NA | non-coding | downstream | 5396 | 46106978 ~ 46110599 (-) |
| G2188883 | NA | non-coding | downstream | 21651 | 46093137 ~ 46094344 (-) |
| G2188872 | NA | non-coding | downstream | 42285 | 46073463 ~ 46073710 (-) |
| G2188584 | NA | non-coding | downstream | 43706 | 46072065 ~ 46072289 (-) |
| G2188902 | NA | non-coding | upstream | 1736 | 46118071 ~ 46118378 (-) |
| G2188904 | NA | non-coding | upstream | 3795 | 46120130 ~ 46120345 (-) |
| G2188907 | NA | non-coding | upstream | 7987 | 46124322 ~ 46124526 (-) |
| G2188912 | NA | non-coding | upstream | 11487 | 46127822 ~ 46128104 (-) |
| G2188920 | NA | non-coding | upstream | 18452 | 46134787 ~ 46135105 (-) |
| G2188877 | NA | other | downstream | 31211 | 46081386 ~ 46084784 (-) |
| G2188420 | NA | other | downstream | 311808 | 45802955 ~ 45804187 (-) |
| G2188287 | NA | other | downstream | 716449 | 45397476 ~ 45399546 (-) |
| G2188280 | NA | other | downstream | 724851 | 45390142 ~ 45391144 (-) |
| G2188868 | chordc1 | other | upstream | 26984 | 46143319 ~ 46157806 (-) |
| G2189115 | NA | other | upstream | 517903 | 46634238 ~ 46636168 (-) |
| G2189204 | NA | other | upstream | 653348 | 46769683 ~ 46769961 (-) |
| G2189814 | NA | other | upstream | 1126714 | 47243049 ~ 47270482 (-) |
| G2189794 | NA | other | upstream | 1169649 | 47285984 ~ 47287003 (-) |
