Gene
RNA
| Item | Value |
|---|---|
| gene id | G2188931 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 46173823 ~ 46179223 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2503154 | False | 401 | lncRNA | 0.50 | 2 | 46173823 | 46179223 |
| TU2503155 | True | 394 | lncRNA | 0.50 | 2 | 46173823 | 46179223 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110510923 | LOC103354503 | coding | downstream | 55755 | 45804868 ~ 46118068 (-) |
| si:ch1073-15f19.2 | NA | coding | downstream | 393552 | 45768732 ~ 45780271 (-) |
| LOC118945350 | NA | coding | downstream | 413252 | 45743616 ~ 45760571 (-) |
| smpd1 | smpd1 | coding | downstream | 484234 | 45668257 ~ 45689589 (-) |
| proser1 | proser1 | coding | downstream | 678388 | 45467311 ~ 45495435 (-) |
| grm5a | LOC100700102 | coding | upstream | 39340 | 46218563 ~ 46294863 (-) |
| tmem135 | tmem135 | coding | upstream | 145978 | 46325201 ~ 46353650 (-) |
| LOC118945303 | NA | coding | upstream | 238770 | 46417993 ~ 46418609 (-) |
| LOC118945322 | NA | coding | upstream | 388208 | 46567431 ~ 46568798 (-) |
| si:dkey-175g6.2 | NA | coding | upstream | 494688 | 46673911 ~ 46683741 (-) |
| G2188870 | NA | non-coding | downstream | 9751 | 46161400 ~ 46164072 (-) |
| G2188925 | NA | non-coding | downstream | 30606 | 46142729 ~ 46143217 (-) |
| G2188924 | NA | non-coding | downstream | 31145 | 46142300 ~ 46142678 (-) |
| G2188921 | NA | non-coding | downstream | 37966 | 46135638 ~ 46135857 (-) |
| G2188920 | NA | non-coding | downstream | 38718 | 46134787 ~ 46135105 (-) |
| G2188937 | NA | non-coding | upstream | 22803 | 46202026 ~ 46203194 (-) |
| G2188941 | NA | non-coding | upstream | 31768 | 46210991 ~ 46215343 (-) |
| G2188944 | NA | non-coding | upstream | 45864 | 46225087 ~ 46228209 (-) |
| G2188959 | NA | non-coding | upstream | 66726 | 46245949 ~ 46247416 (-) |
| G2188970 | NA | non-coding | upstream | 91273 | 46270496 ~ 46271260 (-) |
| G2188868 | chordc1 | other | downstream | 16017 | 46143319 ~ 46157806 (-) |
| G2188877 | NA | other | downstream | 89039 | 46081386 ~ 46084784 (-) |
| G2188420 | NA | other | downstream | 369636 | 45802955 ~ 45804187 (-) |
| G2188287 | NA | other | downstream | 774277 | 45397476 ~ 45399546 (-) |
| G2189115 | NA | other | upstream | 455015 | 46634238 ~ 46636168 (-) |
| G2189204 | NA | other | upstream | 590460 | 46769683 ~ 46769961 (-) |
| G2189814 | NA | other | upstream | 1063826 | 47243049 ~ 47270482 (-) |
| G2189794 | NA | other | upstream | 1106761 | 47285984 ~ 47287003 (-) |
| G2189898 | NA | other | upstream | 1240711 | 47419934 ~ 47428596 (-) |
