Gene
RNA
| Item | Value |
|---|---|
| gene id | G2188978 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 46296599 ~ 46298558 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106563460 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2503223 | True | 279 | lncRNA | 0.38 | 3 | 46296599 | 46298558 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| grm5a | LOC100700102 | coding | downstream | 1736 | 46218563 ~ 46294863 (-) |
| LOC110510923 | LOC103354503 | coding | downstream | 178531 | 45804868 ~ 46118068 (-) |
| si:ch1073-15f19.2 | NA | coding | downstream | 516328 | 45768732 ~ 45780271 (-) |
| LOC118945350 | NA | coding | downstream | 536028 | 45743616 ~ 45760571 (-) |
| smpd1 | smpd1 | coding | downstream | 607010 | 45668257 ~ 45689589 (-) |
| tmem135 | tmem135 | coding | upstream | 26643 | 46325201 ~ 46353650 (-) |
| LOC118945303 | NA | coding | upstream | 119435 | 46417993 ~ 46418609 (-) |
| LOC118945322 | NA | coding | upstream | 268873 | 46567431 ~ 46568798 (-) |
| si:dkey-175g6.2 | NA | coding | upstream | 375353 | 46673911 ~ 46683741 (-) |
| ddx52 | ddx52 | coding | upstream | 592411 | 46890969 ~ 46934960 (-) |
| G2188974 | NA | non-coding | downstream | 11602 | 46284545 ~ 46284997 (-) |
| G2188970 | NA | non-coding | downstream | 25339 | 46270496 ~ 46271260 (-) |
| G2188959 | NA | non-coding | downstream | 49183 | 46245949 ~ 46247416 (-) |
| G2188944 | NA | non-coding | downstream | 68390 | 46225087 ~ 46228209 (-) |
| G2188941 | NA | non-coding | downstream | 81256 | 46210991 ~ 46215343 (-) |
| G2188980 | NA | non-coding | upstream | 2774 | 46301332 ~ 46301589 (-) |
| G2188981 | NA | non-coding | upstream | 10589 | 46309147 ~ 46309451 (-) |
| G2188985 | NA | non-coding | upstream | 18017 | 46316575 ~ 46316906 (-) |
| G2188986 | NA | non-coding | upstream | 18704 | 46317262 ~ 46317497 (-) |
| G2188891 | NA | non-coding | upstream | 21954 | 46320512 ~ 46321003 (-) |
| G2188868 | chordc1 | other | downstream | 138793 | 46143319 ~ 46157806 (-) |
| G2188877 | NA | other | downstream | 211815 | 46081386 ~ 46084784 (-) |
| G2188420 | NA | other | downstream | 492412 | 45802955 ~ 45804187 (-) |
| G2188287 | NA | other | downstream | 897053 | 45397476 ~ 45399546 (-) |
| G2189115 | NA | other | upstream | 335680 | 46634238 ~ 46636168 (-) |
| G2189204 | NA | other | upstream | 471125 | 46769683 ~ 46769961 (-) |
| G2189814 | NA | other | upstream | 944491 | 47243049 ~ 47270482 (-) |
| G2189794 | NA | other | upstream | 987426 | 47285984 ~ 47287003 (-) |
| G2189898 | NA | other | upstream | 1121376 | 47419934 ~ 47428596 (-) |
