G2189000



Basic Information


Item Value
gene id G2189000
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 46376458 ~ 46376867 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2503253
catctaccaataggtgcccttctttgtgagtcattggaaaacctccctggtctttgtggttgaatctgtctttgaaattcactgctcgactgatacaattacagataattgaatgtgtgtgtgcagaggtgaggtagttattcaaaaatcatgttaaacactattattgcacacagagtccatgcaacttattttaTTACTTAATAACCATTTtttcactcctgaacttatttcggCTTGCTATaacaagggggttgaatacttattgaatcaagacatttcagctttataGTTCCACTTTGAAagtatgcggtattgtgtgtaggccagtgacacaaaatctaaattgaatccattttaaattcaggctttaacagaacaaaatgtggaaaaaatgtatttctgaaggc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2503253 True 410 lncRNA 0.35 1 46376458 46376867

Neighbor


gene id symbol gene type direction distance location
tmem135 tmem135 coding downstream 22808 46325201 ~ 46353650 (-)
grm5a LOC100700102 coding downstream 81595 46218563 ~ 46294863 (-)
LOC110510923 LOC103354503 coding downstream 258390 45804868 ~ 46118068 (-)
si:ch1073-15f19.2 NA coding downstream 596187 45768732 ~ 45780271 (-)
LOC118945350 NA coding downstream 615887 45743616 ~ 45760571 (-)
LOC118945303 NA coding upstream 41126 46417993 ~ 46418609 (-)
LOC118945322 NA coding upstream 190564 46567431 ~ 46568798 (-)
si:dkey-175g6.2 NA coding upstream 297044 46673911 ~ 46683741 (-)
ddx52 ddx52 coding upstream 514102 46890969 ~ 46934960 (-)
LOC110510303 LOC106563938 coding upstream 562726 46939593 ~ 46948417 (-)
G2188999 NA non-coding downstream 11919 46363987 ~ 46364539 (-)
G2188995 NA non-coding downstream 18017 46358151 ~ 46358441 (-)
G2188989 NA non-coding downstream 27448 46348323 ~ 46349010 (-)
G2188987 NA non-coding downstream 46238 46329590 ~ 46330220 (-)
G2188890 NA non-coding downstream 51423 46321455 ~ 46325035 (-)
G2189004 NA non-coding upstream 2137 46379004 ~ 46379809 (-)
G2188901 NA non-coding upstream 56322 46433189 ~ 46434222 (-)
G2189027 NA non-coding upstream 70037 46446904 ~ 46448757 (-)
G2189039 NA non-coding upstream 94313 46471180 ~ 46471470 (-)
G2189041 NA non-coding upstream 98372 46475239 ~ 46475544 (-)
G2188868 chordc1 other downstream 218652 46143319 ~ 46157806 (-)
G2188877 NA other downstream 291674 46081386 ~ 46084784 (-)
G2188420 NA other downstream 572271 45802955 ~ 45804187 (-)
G2188287 NA other downstream 976912 45397476 ~ 45399546 (-)
G2189115 NA other upstream 257371 46634238 ~ 46636168 (-)
G2189204 NA other upstream 392816 46769683 ~ 46769961 (-)
G2189814 NA other upstream 866182 47243049 ~ 47270482 (-)
G2189794 NA other upstream 909117 47285984 ~ 47287003 (-)
G2189898 NA other upstream 1043067 47419934 ~ 47428596 (-)

Expression



Co-expression Network