G2189027


Basic Information

Item Value
gene id G2189027
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 46446904 ~ 46448757 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2503283
AAATGTACTGCGCGTTTCTCCAGATTTAATTTTTATGTTCACTGATTCTCATAAAAGGGATGTGTCAGTATAGGAATCGTTAAAGGGGATGTGTCAGTATAGGAATCTTAAAAGGGGATGTGTCAGTATAGGAATTGTTAAAGGGGATGTGTCAGTATAGGAATCTTAAAGGGGATGTGTCAGTATAGGAATCGTTAAAGGGGATGTGTCAGTAAAGAGCAGGTCAAAAAGAGGCCACATAAAGATGGTGGTCTTACCTTCTCCATTGCACGTGTAGGAGTAGTAACCTTCACACTTCAGCATGATGAGTAGTGATCCCCAGCCCAGCAGGACAGCTGAGAAAAACAGGTTCTCTATGATGGCTGTCAACGCCATCCACCATCGCCTGGCGAATGCTGTGGCCAGGGACGGAGCCATGACCAGACGAGGGGGCAGAAAATGTTCTAGAAAGAATATAGTGAGGCCCTCTGTCAGTATCTCTGGAGATCAGGGTTCACAGGTCTGTGAGTCCCAGACACAGACAGCCGAGACAGAAGTTCAGAGTTTCAGAATTCTTCTTCTTTTGATATGTTCCTCGTAGATATCAACCCTCcagctttctctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttctttcaataACCGACATCTGCACGGAGCAGCTTTTATACGAGCTCC

Function

NR:

description
large neutral amino acids transporter small subunit 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2503283 True 735 lncRNA 0.43 3 46446904 46448757

Neighbor

gene id symbol gene type direction distance location
LOC118945303 NA coding downstream 28295 46417993 ~ 46418609 (-)
tmem135 tmem135 coding downstream 93254 46325201 ~ 46353650 (-)
grm5a LOC100700102 coding downstream 152041 46218563 ~ 46294863 (-)
LOC110510923 LOC103354503 coding downstream 328836 45804868 ~ 46118068 (-)
si:ch1073-15f19.2 NA coding downstream 666633 45768732 ~ 45780271 (-)
LOC118945322 NA coding upstream 118674 46567431 ~ 46568798 (-)
si:dkey-175g6.2 NA coding upstream 225154 46673911 ~ 46683741 (-)
ddx52 ddx52 coding upstream 442212 46890969 ~ 46934960 (-)
LOC110510303 LOC106563938 coding upstream 490836 46939593 ~ 46948417 (-)
pigs LOC106592729 coding upstream 509188 46957945 ~ 46972326 (-)
G2188901 NA non-coding downstream 12682 46433189 ~ 46434222 (-)
G2189004 NA non-coding downstream 67095 46379004 ~ 46379809 (-)
G2189000 NA non-coding downstream 70037 46376458 ~ 46376867 (-)
G2188999 NA non-coding downstream 82365 46363987 ~ 46364539 (-)
G2188995 NA non-coding downstream 88463 46358151 ~ 46358441 (-)
G2189039 NA non-coding upstream 22423 46471180 ~ 46471470 (-)
G2189041 NA non-coding upstream 26482 46475239 ~ 46475544 (-)
G2189042 NA non-coding upstream 28574 46477331 ~ 46477882 (-)
G2189044 NA non-coding upstream 31260 46480017 ~ 46480221 (-)
G2189047 NA non-coding upstream 38291 46487048 ~ 46487259 (-)
G2188868 chordc1 other downstream 289098 46143319 ~ 46157806 (-)
G2188877 NA other downstream 362120 46081386 ~ 46084784 (-)
G2188420 NA other downstream 642717 45802955 ~ 45804187 (-)
LOC118945350 NA other downstream 698867 45743616 ~ 45760571 (-)
G2188287 NA other downstream 1047358 45397476 ~ 45399546 (-)
G2189115 NA other upstream 185481 46634238 ~ 46636168 (-)
G2189204 NA other upstream 320926 46769683 ~ 46769961 (-)
G2189814 NA other upstream 794292 47243049 ~ 47270482 (-)
G2189794 NA other upstream 837227 47285984 ~ 47287003 (-)
G2189898 NA other upstream 971177 47419934 ~ 47428596 (-)

Expression


Co-expression Network