Gene
RNA
| Item | Value |
|---|---|
| gene id | G2189076 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 46552039 ~ 46557289 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: phosphatidylinositol transfer protein alpha isoform-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2503350 | True | 385 | lncRNA | 0.49 | 2 | 46552039 | 46557289 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118945303 | NA | coding | downstream | 133430 | 46417993 ~ 46418609 (-) |
| tmem135 | tmem135 | coding | downstream | 198389 | 46325201 ~ 46353650 (-) |
| grm5a | LOC100700102 | coding | downstream | 257176 | 46218563 ~ 46294863 (-) |
| LOC110510923 | LOC103354503 | coding | downstream | 433971 | 45804868 ~ 46118068 (-) |
| si:ch1073-15f19.2 | NA | coding | downstream | 771768 | 45768732 ~ 45780271 (-) |
| LOC118945322 | NA | coding | upstream | 10142 | 46567431 ~ 46568798 (-) |
| si:dkey-175g6.2 | NA | coding | upstream | 116622 | 46673911 ~ 46683741 (-) |
| ddx52 | ddx52 | coding | upstream | 333680 | 46890969 ~ 46934960 (-) |
| LOC110510303 | LOC106563938 | coding | upstream | 382304 | 46939593 ~ 46948417 (-) |
| pigs | LOC106592729 | coding | upstream | 400656 | 46957945 ~ 46972326 (-) |
| G2189056 | NA | non-coding | downstream | 53174 | 46498624 ~ 46498865 (-) |
| G2189048 | LOC106604056 | non-coding | downstream | 63011 | 46488298 ~ 46489028 (-) |
| G2189047 | NA | non-coding | downstream | 64780 | 46487048 ~ 46487259 (-) |
| G2189044 | NA | non-coding | downstream | 71818 | 46480017 ~ 46480221 (-) |
| G2189042 | NA | non-coding | downstream | 74157 | 46477331 ~ 46477882 (-) |
| G2189078 | NA | non-coding | upstream | 1584 | 46558873 ~ 46559711 (-) |
| G2189045 | NA | non-coding | upstream | 11577 | 46568866 ~ 46571317 (-) |
| G2189109 | NA | non-coding | upstream | 70120 | 46627409 ~ 46628416 (-) |
| G2189115 | NA | non-coding | upstream | 76949 | 46634238 ~ 46636168 (-) |
| G2189128 | NA | non-coding | upstream | 111178 | 46668467 ~ 46668671 (-) |
| G2188868 | chordc1 | other | downstream | 394233 | 46143319 ~ 46157806 (-) |
| G2188877 | NA | other | downstream | 467255 | 46081386 ~ 46084784 (-) |
| G2188420 | NA | other | downstream | 747852 | 45802955 ~ 45804187 (-) |
| LOC118945350 | NA | other | downstream | 804002 | 45743616 ~ 45760571 (-) |
| G2188287 | NA | other | downstream | 1152493 | 45397476 ~ 45399546 (-) |
| G2189204 | NA | other | upstream | 212394 | 46769683 ~ 46769961 (-) |
| G2189814 | NA | other | upstream | 685760 | 47243049 ~ 47270482 (-) |
| G2189794 | NA | other | upstream | 728695 | 47285984 ~ 47287003 (-) |
| G2189898 | NA | other | upstream | 862645 | 47419934 ~ 47428596 (-) |
