G2189109


Basic Information

Item Value
gene id G2189109
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 46627409 ~ 46628416 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2503388
TGGTCCCATTCTAGACTAAATGACTCCACCCCCTCGTTACCCCAGCAGGTTCTGACAGCCTCTGGTCCCATTCTAGACTAAATGACTCCACCCCCTCGTTACCCCAGCAGGTTCTGACAGCCTCTGGTCCCATTCTAGACTAAATGACTCCACCCCCTCGTTACCCCAGCAGGGTCTGACAGCCTCTGGTCCCATTCTAGACTAAATTACATTTTTGGTGCTTTTAATAACCATTTTGCCTCAGCCGGCAAACTGTTTTATAGGATCATCTCTGAAAATGATCTCATCCCACTAGAGGGAGTCCTTTAGTCACCTCAGAACAGATTGTAGAGCATGATAGACCAACAGACTTTATTTTCTACCCTTTGATGTCTGTGATGTACTAAGTGCTTTGATTAATATTGATGTTAAAAAAATCCATAGGAGTTGATTCACTTGATTCACTTCTTACTGCAGTACAAAACCATAGGAGCTGATTCACTTCTAACTGCAGTATAAAACCATAGGAGCTGATTCACTTGATTCACTTCTAACTGCAGTATAAAACCATAGGAGCTGATTCACTTGATTCACTTCTAACTGCAGTATAAAACCATAggtgtcacactctgaccattatttgtgttgtttgtttctatgttttgtttgttcagggtgtgatatgagtgggcattctatgttgcatgtctagttagtctatttctatgtgttttggcctgatacggttctcaatcagtggcaggtgtttgtcgttgtctctgattgggaaccatatttaggtagcctgttttgtattgtggttggtgggttattgtctatgttatgttgaaCATTAGCACAGTGTTTCGTTAGCAGTCACGTTTGTCTTGTTAGTTTGTCTTGTTAGTTTGTCTTGTTAGTTTGTCTTGTTAGTTTGTCTTGTTAGTTTGTCTTGTTAGTTTGTCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2503388 True 946 lncRNA 0.41 2 46627409 46628416

Neighbor

gene id symbol gene type direction distance location
LOC118945322 NA coding downstream 58611 46567431 ~ 46568798 (-)
LOC118945303 NA coding downstream 208800 46417993 ~ 46418609 (-)
tmem135 tmem135 coding downstream 273759 46325201 ~ 46353650 (-)
grm5a LOC100700102 coding downstream 332546 46218563 ~ 46294863 (-)
LOC110510923 LOC103354503 coding downstream 509341 45804868 ~ 46118068 (-)
si:dkey-175g6.2 NA coding upstream 45495 46673911 ~ 46683741 (-)
ddx52 ddx52 coding upstream 262553 46890969 ~ 46934960 (-)
LOC110510303 LOC106563938 coding upstream 311177 46939593 ~ 46948417 (-)
pigs LOC106592729 coding upstream 329529 46957945 ~ 46972326 (-)
aldocb aldoc coding upstream 355838 46984254 ~ 47015337 (-)
G2189045 NA non-coding downstream 56092 46568866 ~ 46571317 (-)
G2189078 NA non-coding downstream 67698 46558873 ~ 46559711 (-)
G2189076 NA non-coding downstream 70120 46552039 ~ 46557289 (-)
G2189056 NA non-coding downstream 128544 46498624 ~ 46498865 (-)
G2189048 LOC106604056 non-coding downstream 138381 46488298 ~ 46489028 (-)
G2189115 NA non-coding upstream 5822 46634238 ~ 46636168 (-)
G2189128 NA non-coding upstream 40051 46668467 ~ 46668671 (-)
G2189168 NA non-coding upstream 102911 46731327 ~ 46731737 (-)
G2189172 NA non-coding upstream 109462 46737878 ~ 46738086 (-)
G2189175 NA non-coding upstream 111450 46739866 ~ 46741308 (-)
G2188868 chordc1 other downstream 469603 46143319 ~ 46157806 (-)
G2188877 NA other downstream 542625 46081386 ~ 46084784 (-)
G2188420 NA other downstream 823222 45802955 ~ 45804187 (-)
LOC118945350 NA other downstream 879372 45743616 ~ 45760571 (-)
G2188287 NA other downstream 1227863 45397476 ~ 45399546 (-)
G2189204 NA other upstream 141267 46769683 ~ 46769961 (-)
G2189814 NA other upstream 614633 47243049 ~ 47270482 (-)
G2189794 NA other upstream 657568 47285984 ~ 47287003 (-)
G2189898 NA other upstream 791518 47419934 ~ 47428596 (-)

Expression


Co-expression Network