G2189217


Basic Information

Item Value
gene id G2189217
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 46782458 ~ 46783130 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2503517
actggtctagggtactgtatataaactacaactacagactggtctagggtactgtatataaactacaactacagactggtctagggtactgtatataaactacaactacagactggtctagggtactgtataaaaactacaactacagaccggtctagggtactgtatataaactacaactacagaccggtctagggtactgtatataaactacaactacagaccggtctagggtactgtatataaactacaactacagactggtctagggtactgtataaaaactacagaccggtctagggtactgtatataaactacaactacagaccggtctagggtactgtataaaaactacagaccggtctagggtactgtatataaactacaactacagaccggtctagggtactgtatataaactacaactacagaccggtctagggtactgtatataaactacagactggtctagggtactgtatataaactacaactacagaccggtctagggtactgtataaaaactacaactacagaccggtctagggtactgtatataaactacaactacagaccggtctagggtactgtatataaactacaactacagactggtctagggtactgtatataaactacaactacagactggtctagggtactgtataaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2503517 True 673 lncRNA 0.40 1 46782458 46783130

Neighbor

gene id symbol gene type direction distance location
si:dkey-175g6.2 NA coding downstream 98717 46673911 ~ 46683741 (-)
LOC118945322 NA coding downstream 213660 46567431 ~ 46568798 (-)
LOC118945303 NA coding downstream 363849 46417993 ~ 46418609 (-)
tmem135 tmem135 coding downstream 428808 46325201 ~ 46353650 (-)
grm5a LOC100700102 coding downstream 487595 46218563 ~ 46294863 (-)
ddx52 ddx52 coding upstream 107839 46890969 ~ 46934960 (-)
LOC110510303 LOC106563938 coding upstream 156463 46939593 ~ 46948417 (-)
pigs LOC106592729 coding upstream 174815 46957945 ~ 46972326 (-)
aldocb aldoc coding upstream 201124 46984254 ~ 47015337 (-)
LOC118945349 NA coding upstream 233052 47016181 ~ 47021968 (-)
G2189211 NA non-coding downstream 4377 46777821 ~ 46778081 (-)
G2189209 NA non-coding downstream 5170 46776319 ~ 46777288 (-)
G2189200 NA non-coding downstream 15156 46767080 ~ 46767302 (-)
G2189195 NA non-coding downstream 19244 46762854 ~ 46763214 (-)
G2189186 NA non-coding downstream 31594 46750567 ~ 46750864 (-)
G2189225 NA non-coding upstream 6953 46790083 ~ 46791008 (-)
G2189229 NA non-coding upstream 11009 46794139 ~ 46794419 (-)
G2189238 NA non-coding upstream 16140 46799270 ~ 46799811 (-)
G2189239 NA non-coding upstream 17725 46800855 ~ 46801066 (-)
G2189385 NA non-coding upstream 52807 46835937 ~ 46843581 (-)
G2189204 NA other downstream 12497 46769683 ~ 46769961 (-)
G2189115 NA other downstream 146290 46634238 ~ 46636168 (-)
G2188868 chordc1 other downstream 624652 46143319 ~ 46157806 (-)
G2188877 NA other downstream 697674 46081386 ~ 46084784 (-)
G2188420 NA other downstream 978271 45802955 ~ 45804187 (-)
G2189814 NA other upstream 459919 47243049 ~ 47270482 (-)
G2189794 NA other upstream 502854 47285984 ~ 47287003 (-)
G2189898 NA other upstream 636804 47419934 ~ 47428596 (-)
G2189978 NA other upstream 820021 47603151 ~ 47604511 (-)

Expression


Co-expression Network